Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 AP004607.7-201ENST00000527152 1677 ntBASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 HLA-B-256ENST00000639848 1089 ntBASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC168Q8NDH2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC168Q8NDH2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 LINC01960-201ENST00000563759 1884 ntBASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 AL049597.2-201ENST00000565575 961 ntBASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC168Q8NDH2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC168Q8NDH2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 AC120498.10-201ENST00000621827 505 ntBASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC168Q8NDH2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 AL589743.5-201ENST00000616611 1050 ntBASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 MTDHP1-201ENST00000605323 784 ntBASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC168Q8NDH2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC168Q8NDH2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms