Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ANKRD42Q8N9B4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 AP005212.1-201ENST00000581547 1997 ntBASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
ANKRD42Q8N9B4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ANKRD42Q8N9B4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 BX664725.1-201ENST00000438252 379 ntBASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ANKRD42Q8N9B4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ANKRD42Q8N9B4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 AL451085.2-201ENST00000605085 799 ntBASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms