Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00311Q8N616 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINC00311Q8N616 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00311Q8N616 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 POU5F1P4-201ENST00000413175 1085 ntBASIC17.12■□□□□ 0.33
LINC00311Q8N616 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 CCDC92B-201ENST00000575506 885 ntBASIC17.12■□□□□ 0.33
LINC00311Q8N616 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00311Q8N616 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00311Q8N616 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00311Q8N616 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 KRT18P14-201ENST00000534205 1250 ntBASIC17.11■□□□□ 0.33
LINC00311Q8N616 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 AC008175.2-201ENST00000612840 297 ntBASIC17.11■□□□□ 0.33
LINC00311Q8N616 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LINC00311Q8N616 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 AL024507.2-201ENST00000606070 2574 ntBASIC17.1■□□□□ 0.33
LINC00311Q8N616 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00311Q8N616 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00311Q8N616 AL049796.1-201ENST00000565336 1766 ntBASIC17.1■□□□□ 0.33
LINC00311Q8N616 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00311Q8N616 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00311Q8N616 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00311Q8N616 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LINC00311Q8N616 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00311Q8N616 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00311Q8N616 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC00311Q8N616 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00311Q8N616 AP004607.4-201ENST00000530158 1459 ntBASIC17.08■□□□□ 0.32
LINC00311Q8N616 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00311Q8N616 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00311Q8N616 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LINC00311Q8N616 AC010141.2-201ENST00000452426 721 ntBASIC17.08■□□□□ 0.32
LINC00311Q8N616 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00311Q8N616 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LINC00311Q8N616 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00311Q8N616 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms