Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 MIR3181-201ENST00000578512 73 ntBASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
NUDCD3Q8IVD9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NUDCD3Q8IVD9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD3Q8IVD9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 UNC93B8-201ENST00000511903 705 ntBASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD3Q8IVD9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD3Q8IVD9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.86■□□□□ 0.93
NUDCD3Q8IVD9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 AC009299.2-201ENST00000482477 511 ntBASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 AC010525.1-201ENST00000585559 441 ntBASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 AC006128.1-201ENST00000624704 1661 ntBASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NUDCD3Q8IVD9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms