Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC49Q8IUZ0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC49Q8IUZ0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC49Q8IUZ0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC49Q8IUZ0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LRRC49Q8IUZ0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC49Q8IUZ0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC49Q8IUZ0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC49Q8IUZ0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
LRRC49Q8IUZ0 AP004607.4-201ENST00000530158 1459 ntBASIC21.52■■□□□ 1.03
LRRC49Q8IUZ0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L2-201ENST00000561772 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L6-201ENST00000626483 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L1-201ENST00000627662 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L8-201ENST00000629013 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L3-201ENST00000630187 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L7-201ENST00000630678 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 DUX4L5-201ENST00000630834 1275 ntBASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC49Q8IUZ0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 AC026310.3-201ENST00000625186 2373 ntBASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 AC010141.2-201ENST00000452426 721 ntBASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC49Q8IUZ0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 KRT19P1-201ENST00000405746 1186 ntBASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 AC026271.2-201ENST00000428091 497 ntBASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 KRT18P20-201ENST00000548986 1279 ntBASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC49Q8IUZ0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.48■■□□□ 1.03
LRRC49Q8IUZ0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms