Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 MIR572-201ENST00000384983 95 ntBASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.12■■□□□ 1.13
CPNE8Q86YQ8 AC073130.3-201ENST00000624389 2278 ntBASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 AC091305.1-201ENST00000479476 895 ntBASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CPNE8Q86YQ8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.1■■□□□ 1.13
CPNE8Q86YQ8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 BX005040.4-201ENST00000637145 1518 ntBASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE8Q86YQ8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 AL139246.5-201ENST00000606645 996 ntBASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE8Q86YQ8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.08■■□□□ 1.12
CPNE8Q86YQ8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 AC009237.3-201ENST00000393279 1427 ntBASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 MIR6084-201ENST00000622012 110 ntBASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE8Q86YQ8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE8Q86YQ8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms