Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 AC019171.1-201ENST00000601251 1056 ntBASIC17.49■□□□□ 0.39
ZNF546Q86UE3 AC009086.3-201ENST00000623486 1008 ntBASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF546Q86UE3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 C17orf82-201ENST00000623772 1530 ntBASIC17.48■□□□□ 0.39
ZNF546Q86UE3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF546Q86UE3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 AC026471.6-201ENST00000622954 1905 ntBASIC17.47■□□□□ 0.39
ZNF546Q86UE3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF546Q86UE3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 FP325331.1-202ENST00000623531 1380 ntBASIC17.46■□□□□ 0.39
ZNF546Q86UE3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZNF546Q86UE3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF546Q86UE3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.38
ZNF546Q86UE3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 AC004448.1-201ENST00000458332 883 ntBASIC17.45■□□□□ 0.38
ZNF546Q86UE3 AC129492.7-201ENST00000622992 756 ntBASIC17.45■□□□□ 0.38
ZNF546Q86UE3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF546Q86UE3 BX323043.1-201ENST00000641006 1765 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms