Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LCA10Q71F78 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LCA10Q71F78 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.31□□□□□ -0.6
LCA10Q71F78 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 NEFHP1-201ENST00000412845 2629 ntBASIC11.31□□□□□ -0.6
LCA10Q71F78 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC11.31□□□□□ -0.6
LCA10Q71F78 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC11.31□□□□□ -0.6
LCA10Q71F78 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.31□□□□□ -0.6
LCA10Q71F78 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LCA10Q71F78 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LCA10Q71F78 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 AL139384.1-201ENST00000612143 3047 ntBASIC11.3□□□□□ -0.6
LCA10Q71F78 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LCA10Q71F78 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC11.3□□□□□ -0.6
LCA10Q71F78 MIR4449-201ENST00000578365 66 ntBASIC11.3□□□□□ -0.6
LCA10Q71F78 AC018755.3-202ENST00000596210 929 ntBASIC11.3□□□□□ -0.6
LCA10Q71F78 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LCA10Q71F78 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
LCA10Q71F78 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 AL032819.2-201ENST00000624543 2162 ntBASIC11.3□□□□□ -0.6
LCA10Q71F78 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LCA10Q71F78 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 AFG3L1P-217ENST00000557444 2447 ntBASIC11.29□□□□□ -0.6
LCA10Q71F78 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.29□□□□□ -0.6
LCA10Q71F78 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LCA10Q71F78 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LCA10Q71F78 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LCA10Q71F78 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 CD37-213ENST00000598095 1598 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
LCA10Q71F78 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 AC092068.2-201ENST00000590491 1708 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms