Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 AP001330.3-201ENST00000520123 633 ntBASIC25.71■■□□□ 1.71
CASC1Q6TDU7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CASC1Q6TDU7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CASC1Q6TDU7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.7■■□□□ 1.7
CASC1Q6TDU7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASC1Q6TDU7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CASC1Q6TDU7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 AF213884.3-201ENST00000563833 479 ntBASIC25.69■■□□□ 1.7
CASC1Q6TDU7 AL031432.3-201ENST00000607698 485 ntBASIC25.69■■□□□ 1.7
CASC1Q6TDU7 AC105233.4-201ENST00000642045 216 ntBASIC25.69■■□□□ 1.7
CASC1Q6TDU7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CASC1Q6TDU7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 TSPY26P-201ENST00000476365 1326 ntBASIC25.68■■□□□ 1.7
CASC1Q6TDU7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 AL049796.1-201ENST00000565336 1766 ntBASIC25.68■■□□□ 1.7
CASC1Q6TDU7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASC1Q6TDU7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 MIR939-201ENST00000401314 82 ntBASIC25.67■■□□□ 1.7
CASC1Q6TDU7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.67■■□□□ 1.7
CASC1Q6TDU7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASC1Q6TDU7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms