Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 NEFHP1-201ENST00000412845 2629 ntBASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88Q6PEY1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88Q6PEY1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88Q6PEY1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 AC010980.1-201ENST00000587192 1142 ntBASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88Q6PEY1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 GABARAPL3-202ENST00000624044 1851 ntBASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 AP000974.1-201ENST00000623909 2387 ntBASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 AC005332.8-201ENST00000622750 2735 ntBASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88Q6PEY1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms