Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.89■■□□□ 1.26
CNKSR3Q6P9H4 KRT17P1-201ENST00000399211 1546 ntBASIC22.89■■□□□ 1.26
CNKSR3Q6P9H4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 FAM21FP-204ENST00000608637 956 ntBASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CNKSR3Q6P9H4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNKSR3Q6P9H4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 AC139530.1-201ENST00000575312 1977 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 AL355472.2-201ENST00000422958 438 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 UBE2SP1-201ENST00000450587 669 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 AC008550.1-201ENST00000511500 884 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 AC060766.5-201ENST00000590539 871 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 AC100791.3-201ENST00000617619 330 ntBASIC22.87■■□□□ 1.25
CNKSR3Q6P9H4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CNKSR3Q6P9H4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 AC091799.1-201ENST00000422823 811 ntBASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 AC008403.3-201ENST00000598924 454 ntBASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 CYP2T3P-201ENST00000601990 817 ntBASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 AL359736.2-201ENST00000621992 437 ntBASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 HLA-B-256ENST00000639848 1089 ntBASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.85■■□□□ 1.25
CNKSR3Q6P9H4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 CDV3P1-201ENST00000471403 739 ntBASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CNKSR3Q6P9H4 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CNKSR3Q6P9H4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNKSR3Q6P9H4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms