Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM53Q6P2H8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM53Q6P2H8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 EDA-201ENST00000338901 1233 ntBASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM53Q6P2H8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 AC005229.4-201ENST00000610085 2198 ntBASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 BX842568.3-201ENST00000418104 571 ntBASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 AC010525.1-201ENST00000585559 441 ntBASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM53Q6P2H8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 AC233992.3-201ENST00000607491 485 ntBASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 AL355001.2-201ENST00000620617 1191 ntBASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TMEM53Q6P2H8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM53Q6P2H8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms