Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDPF1Q6NVV7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDPF1Q6NVV7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 MIR4508-201ENST00000584178 70 ntBASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AL032819.2-201ENST00000624543 2162 ntBASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 GABARAPL3-202ENST00000624044 1851 ntBASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 AC087742.1-201ENST00000575880 1738 ntBASIC15.97■□□□□ 0.15
CDPF1Q6NVV7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDPF1Q6NVV7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 AL049812.1-201ENST00000432563 2267 ntBASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDPF1Q6NVV7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 KRT8P33-201ENST00000508125 1423 ntBASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 AC012313.1-201ENST00000593393 3059 ntBASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDPF1Q6NVV7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 KRT18P10-201ENST00000388836 1287 ntBASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 AC009299.2-201ENST00000482477 511 ntBASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 AC019171.1-201ENST00000601251 1056 ntBASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 AC020916.1-201ENST00000587762 1774 ntBASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.94■□□□□ 0.14
CDPF1Q6NVV7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms