Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 MIR718-201ENST00000390190 70 ntBASIC20.91■□□□□ 0.94
SF3A2Q15428 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.91■□□□□ 0.94
SF3A2Q15428 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.91■□□□□ 0.94
SF3A2Q15428 AC211429.1-201ENST00000415277 523 ntBASIC20.91■□□□□ 0.94
SF3A2Q15428 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.91■□□□□ 0.94
SF3A2Q15428 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SF3A2Q15428 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.91■□□□□ 0.94
SF3A2Q15428 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.91■□□□□ 0.94
SF3A2Q15428 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 MIR4497-201ENST00000583208 89 ntBASIC20.91■□□□□ 0.94
SF3A2Q15428 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.91■□□□□ 0.94
SF3A2Q15428 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SF3A2Q15428 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.9■□□□□ 0.94
SF3A2Q15428 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.9■□□□□ 0.94
SF3A2Q15428 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.9■□□□□ 0.94
SF3A2Q15428 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.9■□□□□ 0.94
SF3A2Q15428 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.9■□□□□ 0.94
SF3A2Q15428 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SF3A2Q15428 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SF3A2Q15428 FAM197Y4-202ENST00000622692 608 ntBASIC20.9■□□□□ 0.94
SF3A2Q15428 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SF3A2Q15428 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.89■□□□□ 0.94
SF3A2Q15428 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SF3A2Q15428 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.89■□□□□ 0.93
SF3A2Q15428 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.89■□□□□ 0.93
SF3A2Q15428 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.89■□□□□ 0.93
SF3A2Q15428 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
SF3A2Q15428 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.89■□□□□ 0.93
SF3A2Q15428 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
SF3A2Q15428 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.89■□□□□ 0.93
SF3A2Q15428 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SF3A2Q15428 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
SF3A2Q15428 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.88■□□□□ 0.93
SF3A2Q15428 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
SF3A2Q15428 AL591742.1-201ENST00000604433 565 ntBASIC20.88■□□□□ 0.93
SF3A2Q15428 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 AC120498.10-201ENST00000621827 505 ntBASIC20.88■□□□□ 0.93
SF3A2Q15428 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.88■□□□□ 0.93
SF3A2Q15428 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.88■□□□□ 0.93
SF3A2Q15428 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SF3A2Q15428 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.87■□□□□ 0.93
SF3A2Q15428 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 LSM12P1-201ENST00000411836 588 ntBASIC20.87■□□□□ 0.93
SF3A2Q15428 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.87■□□□□ 0.93
SF3A2Q15428 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.87■□□□□ 0.93
SF3A2Q15428 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.87■□□□□ 0.93
SF3A2Q15428 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SF3A2Q15428 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.87■□□□□ 0.93
SF3A2Q15428 AC008403.3-201ENST00000598924 454 ntBASIC20.87■□□□□ 0.93
SF3A2Q15428 REXO1L12P-201ENST00000622156 912 ntBASIC20.87■□□□□ 0.93
SF3A2Q15428 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SF3A2Q15428 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SF3A2Q15428 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SF3A2Q15428 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SF3A2Q15428 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.86■□□□□ 0.93
SF3A2Q15428 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SF3A2Q15428 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SF3A2Q15428 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SF3A2Q15428 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SF3A2Q15428 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SF3A2Q15428 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SF3A2Q15428 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SF3A2Q15428 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SF3A2Q15428 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms