Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YER165C-AYER165C-A 357 nt2.61□□□□□ -1.99
RKR1Q04781 YML090WYML090W 387 nt2.61□□□□□ -1.99
RKR1Q04781 CSI1YMR025W 888 nt2.61□□□□□ -1.99
RKR1Q04781 TAF2YCR042C 4224 nt2.61□□□□□ -1.99
RKR1Q04781 YDR089WYDR089W 2610 nt2.6□□□□□ -1.99
RKR1Q04781 CDC55YGL190C 1581 nt2.6□□□□□ -1.99
RKR1Q04781 DNF3YMR162C 4971 nt2.6□□□□□ -1.99
RKR1Q04781 YER133W-AYER133W-A 342 nt2.6□□□□□ -1.99
RKR1Q04781 YPR203WYPR203W 309 nt2.6□□□□□ -1.99
RKR1Q04781 IOC3YFR013W 2364 nt2.59□□□□□ -1.99
RKR1Q04781 PHR1YOR386W 1698 nt2.59□□□□□ -1.99
RKR1Q04781 RTP1YMR185W 2946 nt2.59□□□□□ -1.99
RKR1Q04781 NET1YJL076W 3570 nt2.59□□□□□ -1.99
RKR1Q04781 UBP6YFR010W 1500 nt2.59□□□□□ -1.99
RKR1Q04781 YDL118WYDL118W 381 nt2.59□□□□□ -1.99
RKR1Q04781 RTT102YGR275W 474 nt2.59□□□□□ -1.99
RKR1Q04781 PHS1YJL097W 654 nt2.59□□□□□ -1.99
RKR1Q04781 TPS2YDR074W 2691 nt2.59□□□□□ -2
RKR1Q04781 MGT1YDL200C 567 nt2.58□□□□□ -2
RKR1Q04781 DAD2YKR083C 402 nt2.58□□□□□ -2
RKR1Q04781 CLU1YMR012W 3834 nt2.58□□□□□ -2
RKR1Q04781 SRS2YJL092W 3525 nt2.58□□□□□ -2
RKR1Q04781 IXR1YKL032C 1794 nt2.58□□□□□ -2
RKR1Q04781 IRC10YOL015W 1761 nt2.58□□□□□ -2
RKR1Q04781 FAR11YNL127W 2862 nt2.57□□□□□ -2
RKR1Q04781 EPO1YMR124W 2832 nt2.57□□□□□ -2
RKR1Q04781 LRE1YCL051W 1752 nt2.57□□□□□ -2
RKR1Q04781 CSF1YLR087C 8877 nt2.57□□□□□ -2
RKR1Q04781 IMH1YLR309C 2736 nt2.57□□□□□ -2
RKR1Q04781 SEC28YIL076W 891 nt2.57□□□□□ -2
RKR1Q04781 CDC123YLR215C 1083 nt2.57□□□□□ -2
RKR1Q04781 OST6YML019W 999 nt2.57□□□□□ -2
RKR1Q04781 SSU72YNL222W 621 nt2.57□□□□□ -2
RKR1Q04781 UTP13YLR222C 2454 nt2.56□□□□□ -2
RKR1Q04781 PDR8YLR266C 2106 nt2.56□□□□□ -2
RKR1Q04781 MPP10YJR002W 1782 nt2.56□□□□□ -2
RKR1Q04781 ECM7YLR443W 1347 nt2.56□□□□□ -2
RKR1Q04781 GSH2YOL049W 1476 nt2.56□□□□□ -2
RKR1Q04781 TRA1YHR099W 11235 nt2.56□□□□□ -2
RKR1Q04781 HYP2YEL034W 474 nt2.55□□□□□ -2
RKR1Q04781 SPI1YER150W 447 nt2.55□□□□□ -2
RKR1Q04781 YMR306C-AYMR306C-A 390 nt2.55□□□□□ -2
RKR1Q04781 RNA14YMR061W 2034 nt2.55□□□□□ -2
RKR1Q04781 KRE2YDR483W 1329 nt2.55□□□□□ -2
RKR1Q04781 AIM39YOL053W 1188 nt2.54□□□□□ -2
RKR1Q04781 VAM10YOR068C 345 nt2.54□□□□□ -2
RKR1Q04781 CDC31YOR257W 486 nt2.54□□□□□ -2
RKR1Q04781 ARL1YBR164C 552 nt2.54□□□□□ -2
RKR1Q04781 SAD1YFR005C 1347 nt2.54□□□□□ -2
RKR1Q04781 TOP1YOL006C 2310 nt2.54□□□□□ -2
RKR1Q04781 FIG4YNL325C 2640 nt2.54□□□□□ -2
RKR1Q04781 CPR5YDR304C 678 nt2.53□□□□□ -2
RKR1Q04781 YOS1YER074W-A 258 nt2.53□□□□□ -2
RKR1Q04781 TMA22YJR014W 597 nt2.53□□□□□ -2
RKR1Q04781 SPS18YNL204C 903 nt2.53□□□□□ -2
RKR1Q04781 FES1YBR101C 873 nt2.53□□□□□ -2
RKR1Q04781 VPS16YPL045W 2397 nt2.53□□□□□ -2
RKR1Q04781 GRR1YJR090C 3456 nt2.53□□□□□ -2
RKR1Q04781 TRZ1YKR079C 2517 nt2.53□□□□□ -2
RKR1Q04781 ADY4YLR227C 1482 nt2.53□□□□□ -2.01
RKR1Q04781 PDP3YLR455W 915 nt2.53□□□□□ -2.01
RKR1Q04781 DAD3YBR233W-A 285 nt2.53□□□□□ -2.01
RKR1Q04781 PUT2YHR037W 1728 nt2.53□□□□□ -2.01
RKR1Q04781 YKR023WYKR023W 1593 nt2.52□□□□□ -2.01
RKR1Q04781 CFT2YLR115W 2580 nt2.52□□□□□ -2.01
RKR1Q04781 YJL070CYJL070C 2667 nt2.52□□□□□ -2.01
RKR1Q04781 ISF1YMR081C 1017 nt2.52□□□□□ -2.01
RKR1Q04781 IBD2YNL164C 1056 nt2.52□□□□□ -2.01
RKR1Q04781 CBS2YDR197W 1170 nt2.51□□□□□ -2.01
RKR1Q04781 VMA8YEL051W 771 nt2.51□□□□□ -2.01
RKR1Q04781 YVH1YIR026C 1095 nt2.51□□□□□ -2.01
RKR1Q04781 CAP1YKL007W 807 nt2.51□□□□□ -2.01
RKR1Q04781 REC114YMR133W 1287 nt2.51□□□□□ -2.01
RKR1Q04781 AFT2YPL202C 1251 nt2.51□□□□□ -2.01
RKR1Q04781 NAN1YPL126W 2691 nt2.51□□□□□ -2.01
RKR1Q04781 MEC1YBR136W 7107 nt2.51□□□□□ -2.01
RKR1Q04781 CWC24YLR323C 780 nt2.5□□□□□ -2.01
RKR1Q04781 TOM1YDR457W 9807 nt2.5□□□□□ -2.01
RKR1Q04781 PMT4YJR143C 2289 nt2.5□□□□□ -2.01
RKR1Q04781 YDR203WYDR203W 318 nt2.49□□□□□ -2.01
RKR1Q04781 SMX2YFL017W-A 234 nt2.49□□□□□ -2.01
RKR1Q04781 ERV29YGR284C 933 nt2.49□□□□□ -2.01
RKR1Q04781 GCD7YLR291C 1146 nt2.49□□□□□ -2.01
RKR1Q04781 SIL1YOL031C 1266 nt2.49□□□□□ -2.01
RKR1Q04781 RPS30BYOR182C 192 nt2.49□□□□□ -2.01
RKR1Q04781 SMA1YPL027W 738 nt2.49□□□□□ -2.01
RKR1Q04781 SET1YHR119W 3243 nt2.49□□□□□ -2.01
RKR1Q04781 ISW1YBR245C 3390 nt2.49□□□□□ -2.01
RKR1Q04781 CTF13YMR094W 1437 nt2.49□□□□□ -2.01
RKR1Q04781 MED2YDL005C 1296 nt2.49□□□□□ -2.01
RKR1Q04781 YJL028WYJL028W 336 nt2.49□□□□□ -2.01
RKR1Q04781 PCD1YLR151C 1023 nt2.49□□□□□ -2.01
RKR1Q04781 YBR090CYBR090C 369 nt2.49□□□□□ -2.01
RKR1Q04781 RRI1YDL216C 1323 nt2.48□□□□□ -2.01
RKR1Q04781 YFH1YDL120W 525 nt2.48□□□□□ -2.01
RKR1Q04781 TVP15YDR100W 432 nt2.48□□□□□ -2.01
RKR1Q04781 FRE2YKL220C 2136 nt2.48□□□□□ -2.01
RKR1Q04781 RNY1YPL123C 1305 nt2.48□□□□□ -2.01
RKR1Q04781 VPS35YJL154C 2835 nt2.47□□□□□ -2.01
RKR1Q04781 TRM732YMR259C 4263 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms