Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.65■□□□□ 0.74
VLDLRP98155 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VLDLRP98155 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.65■□□□□ 0.74
VLDLRP98155 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.74
VLDLRP98155 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VLDLRP98155 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VLDLRP98155 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VLDLRP98155 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.64■□□□□ 0.73
VLDLRP98155 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.64■□□□□ 0.73
VLDLRP98155 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.64■□□□□ 0.73
VLDLRP98155 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.64■□□□□ 0.73
VLDLRP98155 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.64■□□□□ 0.73
VLDLRP98155 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VLDLRP98155 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VLDLRP98155 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VLDLRP98155 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VLDLRP98155 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.63■□□□□ 0.73
VLDLRP98155 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VLDLRP98155 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VLDLRP98155 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VLDLRP98155 AC110285.6-201ENST00000617652 491 ntBASIC19.63■□□□□ 0.73
VLDLRP98155 AC092667.1-201ENST00000434301 2586 ntBASIC19.63■□□□□ 0.73
VLDLRP98155 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.63■□□□□ 0.73
VLDLRP98155 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VLDLRP98155 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
VLDLRP98155 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VLDLRP98155 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VLDLRP98155 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.62■□□□□ 0.73
VLDLRP98155 AL034346.1-201ENST00000568244 1277 ntBASIC19.62■□□□□ 0.73
VLDLRP98155 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.62■□□□□ 0.73
VLDLRP98155 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.62■□□□□ 0.73
VLDLRP98155 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.62■□□□□ 0.73
VLDLRP98155 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.62■□□□□ 0.73
VLDLRP98155 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VLDLRP98155 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VLDLRP98155 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
VLDLRP98155 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VLDLRP98155 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VLDLRP98155 AP004607.7-201ENST00000527152 1677 ntBASIC19.61■□□□□ 0.73
VLDLRP98155 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VLDLRP98155 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VLDLRP98155 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VLDLRP98155 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VLDLRP98155 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
VLDLRP98155 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VLDLRP98155 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VLDLRP98155 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VLDLRP98155 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VLDLRP98155 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VLDLRP98155 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
VLDLRP98155 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VLDLRP98155 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.6■□□□□ 0.73
VLDLRP98155 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VLDLRP98155 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.6■□□□□ 0.73
VLDLRP98155 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.6■□□□□ 0.73
VLDLRP98155 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VLDLRP98155 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VLDLRP98155 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms