Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4CP60510 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4CP60510 AL512625.2-201ENST00000417533 625 ntBASIC25.15■■□□□ 1.62
PPP4CP60510 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4CP60510 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4CP60510 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PPP4CP60510 AC068473.5-201ENST00000616428 2072 ntBASIC25.14■■□□□ 1.62
PPP4CP60510 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PPP4CP60510 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 SLC29A4P1-201ENST00000398760 971 ntBASIC25.14■■□□□ 1.62
PPP4CP60510 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4CP60510 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
PPP4CP60510 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
PPP4CP60510 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.14■■□□□ 1.62
PPP4CP60510 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4CP60510 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4CP60510 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4CP60510 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PPP4CP60510 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4CP60510 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
PPP4CP60510 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.13■■□□□ 1.61
PPP4CP60510 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 AC073210.2-201ENST00000430369 194 ntBASIC25.13■■□□□ 1.61
PPP4CP60510 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.13■■□□□ 1.61
PPP4CP60510 AL591742.1-201ENST00000604433 565 ntBASIC25.13■■□□□ 1.61
PPP4CP60510 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4CP60510 GUSBP5-202ENST00000510805 1989 ntBASIC25.13■■□□□ 1.61
PPP4CP60510 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.12■■□□□ 1.61
PPP4CP60510 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PPP4CP60510 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.12■■□□□ 1.61
PPP4CP60510 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.12■■□□□ 1.61
PPP4CP60510 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.12■■□□□ 1.61
PPP4CP60510 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4CP60510 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.12■■□□□ 1.61
PPP4CP60510 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.12■■□□□ 1.61
PPP4CP60510 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4CP60510 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 AC233723.2-201ENST00000623798 2106 ntBASIC25.11■■□□□ 1.61
PPP4CP60510 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.11■■□□□ 1.61
PPP4CP60510 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4CP60510 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.1■■□□□ 1.61
PPP4CP60510 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.1■■□□□ 1.61
PPP4CP60510 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4CP60510 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
PPP4CP60510 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PPP4CP60510 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 AC093787.1-201ENST00000450396 207 ntBASIC25.09■■□□□ 1.61
PPP4CP60510 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.09■■□□□ 1.61
PPP4CP60510 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.09■■□□□ 1.61
PPP4CP60510 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.09■■□□□ 1.61
PPP4CP60510 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.09■■□□□ 1.61
PPP4CP60510 AC069236.1-201ENST00000604339 616 ntBASIC25.09■■□□□ 1.61
PPP4CP60510 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.09■■□□□ 1.61
PPP4CP60510 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 C11orf96-202ENST00000528572 1834 ntBASIC25.09■■□□□ 1.61
PPP4CP60510 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PPP4CP60510 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4CP60510 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4CP60510 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4CP60510 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.08■■□□□ 1.61
PPP4CP60510 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP4CP60510 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.08■■□□□ 1.61
PPP4CP60510 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.08■■□□□ 1.61
PPP4CP60510 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.08■■□□□ 1.61
PPP4CP60510 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.08■■□□□ 1.61
PPP4CP60510 AC016405.3-201ENST00000607710 860 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms