Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 LINC01960-201ENST00000563759 1884 ntBASIC15.97■□□□□ 0.15
HIST1H2BDP58876 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H2BDP58876 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HIST1H2BDP58876 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2BDP58876 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2BDP58876 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
HIST1H2BDP58876 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.96■□□□□ 0.14
HIST1H2BDP58876 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HIST1H2BDP58876 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 CIB2-204ENST00000557846 934 ntTSL 3 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 AC027702.1-201ENST00000563810 1770 ntBASIC15.95■□□□□ 0.14
HIST1H2BDP58876 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HIST1H2BDP58876 AL049812.1-201ENST00000432563 2267 ntBASIC15.94■□□□□ 0.14
HIST1H2BDP58876 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 RARRES2P7-201ENST00000567349 469 ntBASIC15.94■□□□□ 0.14
HIST1H2BDP58876 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 AC006128.1-201ENST00000624704 1661 ntBASIC15.94■□□□□ 0.14
HIST1H2BDP58876 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HIST1H2BDP58876 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 AC093503.3-201ENST00000624917 2352 ntBASIC15.93■□□□□ 0.14
HIST1H2BDP58876 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H2BDP58876 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H2BDP58876 AC008813.1-201ENST00000536597 885 ntBASIC15.92■□□□□ 0.14
HIST1H2BDP58876 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms