Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFERP55789 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
GFERP55789 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFERP55789 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFERP55789 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFERP55789 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.23■□□□□ 0.83
GFERP55789 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GFERP55789 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
GFERP55789 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.23■□□□□ 0.83
GFERP55789 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
GFERP55789 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GFERP55789 AC233723.2-201ENST00000623798 2106 ntBASIC20.23■□□□□ 0.83
GFERP55789 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFERP55789 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.22■□□□□ 0.83
GFERP55789 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
GFERP55789 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
GFERP55789 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GFERP55789 RBM17P2-201ENST00000616397 1405 ntBASIC20.22■□□□□ 0.83
GFERP55789 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFERP55789 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.22■□□□□ 0.83
GFERP55789 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFERP55789 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.22■□□□□ 0.83
GFERP55789 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.22■□□□□ 0.83
GFERP55789 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.22■□□□□ 0.83
GFERP55789 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GFERP55789 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.22■□□□□ 0.83
GFERP55789 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GFERP55789 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
GFERP55789 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
GFERP55789 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.21■□□□□ 0.83
GFERP55789 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GFERP55789 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.21■□□□□ 0.83
GFERP55789 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 GUSBP5-202ENST00000510805 1989 ntBASIC20.21■□□□□ 0.83
GFERP55789 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFERP55789 AC242852.2-201ENST00000615738 1807 ntBASIC20.2■□□□□ 0.82
GFERP55789 AC068473.5-201ENST00000616428 2072 ntBASIC20.2■□□□□ 0.82
GFERP55789 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.2■□□□□ 0.82
GFERP55789 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.2■□□□□ 0.82
GFERP55789 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
GFERP55789 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.2■□□□□ 0.82
GFERP55789 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFERP55789 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
GFERP55789 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
GFERP55789 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 C11orf96-202ENST00000528572 1834 ntBASIC20.19■□□□□ 0.82
GFERP55789 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.19■□□□□ 0.82
GFERP55789 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.19■□□□□ 0.82
GFERP55789 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.19■□□□□ 0.82
GFERP55789 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.19■□□□□ 0.82
GFERP55789 AC098934.4-201ENST00000564127 592 ntBASIC20.19■□□□□ 0.82
GFERP55789 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.19■□□□□ 0.82
GFERP55789 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.19■□□□□ 0.82
GFERP55789 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.19■□□□□ 0.82
GFERP55789 AC016405.3-201ENST00000607710 860 ntBASIC20.19■□□□□ 0.82
GFERP55789 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
GFERP55789 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFERP55789 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 AC093787.1-201ENST00000450396 207 ntBASIC20.18■□□□□ 0.82
GFERP55789 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
GFERP55789 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.18■□□□□ 0.82
GFERP55789 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.18■□□□□ 0.82
GFERP55789 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.18■□□□□ 0.82
GFERP55789 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.18■□□□□ 0.82
GFERP55789 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFERP55789 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GFERP55789 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.17■□□□□ 0.82
GFERP55789 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.17■□□□□ 0.82
GFERP55789 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms