Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PAX9P55771 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.93■□□□□ 0.3
PAX9P55771 pRNA.6-201ENST00000610482 90 ntBASIC16.93■□□□□ 0.3
PAX9P55771 pRNA.5-201ENST00000612139 90 ntBASIC16.93■□□□□ 0.3
PAX9P55771 pRNA.11-201ENST00000618423 90 ntBASIC16.93■□□□□ 0.3
PAX9P55771 pRNA.13-201ENST00000619112 90 ntBASIC16.93■□□□□ 0.3
PAX9P55771 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.93■□□□□ 0.3
PAX9P55771 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PAX9P55771 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.93■□□□□ 0.3
PAX9P55771 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAX9P55771 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PAX9P55771 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PAX9P55771 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PAX9P55771 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 AC027702.1-201ENST00000563810 1770 ntBASIC16.92■□□□□ 0.3
PAX9P55771 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.92■□□□□ 0.3
PAX9P55771 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 AC006455.2-201ENST00000429931 906 ntBASIC16.92■□□□□ 0.3
PAX9P55771 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.92■□□□□ 0.3
PAX9P55771 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PAX9P55771 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.92■□□□□ 0.3
PAX9P55771 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAX9P55771 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAX9P55771 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PAX9P55771 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PAX9P55771 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAX9P55771 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PAX9P55771 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.91■□□□□ 0.3
PAX9P55771 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PAX9P55771 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAX9P55771 AC010141.3-201ENST00000456659 717 ntBASIC16.91■□□□□ 0.3
PAX9P55771 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.91■□□□□ 0.3
PAX9P55771 AL117332.1-201ENST00000622628 974 ntBASIC16.91■□□□□ 0.3
PAX9P55771 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAX9P55771 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PAX9P55771 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAX9P55771 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.91■□□□□ 0.3
PAX9P55771 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAX9P55771 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PAX9P55771 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PAX9P55771 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PAX9P55771 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.9■□□□□ 0.3
PAX9P55771 AL034346.1-201ENST00000568244 1277 ntBASIC16.9■□□□□ 0.3
PAX9P55771 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAX9P55771 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.9■□□□□ 0.3
PAX9P55771 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAX9P55771 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PAX9P55771 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAX9P55771 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.89■□□□□ 0.3
PAX9P55771 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.89■□□□□ 0.3
PAX9P55771 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PAX9P55771 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.89■□□□□ 0.29
PAX9P55771 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.89■□□□□ 0.29
PAX9P55771 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 AC010997.5-201ENST00000609182 354 ntBASIC16.89■□□□□ 0.29
PAX9P55771 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PAX9P55771 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.89■□□□□ 0.29
PAX9P55771 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PAX9P55771 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PAX9P55771 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PAX9P55771 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.88■□□□□ 0.29
PAX9P55771 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
PAX9P55771 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PAX9P55771 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.88■□□□□ 0.29
PAX9P55771 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms