Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCNKAP51800 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCNKAP51800 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCNKAP51800 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCNKAP51800 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCNKAP51800 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCNKAP51800 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCNKAP51800 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCNKAP51800 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.69■□□□□ 0.9
CLCNKAP51800 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.69■□□□□ 0.9
CLCNKAP51800 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLCNKAP51800 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCNKAP51800 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLCNKAP51800 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCNKAP51800 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCNKAP51800 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCNKAP51800 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCNKAP51800 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCNKAP51800 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.68■□□□□ 0.9
CLCNKAP51800 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLCNKAP51800 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCNKAP51800 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCNKAP51800 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCNKAP51800 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCNKAP51800 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCNKAP51800 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCNKAP51800 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CLCNKAP51800 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCNKAP51800 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCNKAP51800 AC026185.1-201ENST00000445748 174 ntBASIC20.67■□□□□ 0.9
CLCNKAP51800 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCNKAP51800 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
CLCNKAP51800 DUX4L16-201ENST00000555130 1264 ntBASIC20.67■□□□□ 0.9
CLCNKAP51800 AC120498.10-201ENST00000621827 505 ntBASIC20.67■□□□□ 0.9
CLCNKAP51800 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCNKAP51800 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCNKAP51800 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCNKAP51800 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCNKAP51800 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCNKAP51800 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.66■□□□□ 0.9
CLCNKAP51800 AC231657.2-201ENST00000624556 255 ntBASIC20.66■□□□□ 0.9
CLCNKAP51800 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLCNKAP51800 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCNKAP51800 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLCNKAP51800 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCNKAP51800 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCNKAP51800 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCNKAP51800 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCNKAP51800 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
CLCNKAP51800 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.65■□□□□ 0.9
CLCNKAP51800 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCNKAP51800 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCNKAP51800 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCNKAP51800 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCNKAP51800 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCNKAP51800 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.64■□□□□ 0.9
CLCNKAP51800 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CLCNKAP51800 KRT16P2-201ENST00000414673 1423 ntBASIC20.64■□□□□ 0.89
CLCNKAP51800 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCNKAP51800 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKAP51800 SLC7A5P2-201ENST00000553010 536 ntBASIC20.64■□□□□ 0.89
CLCNKAP51800 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCNKAP51800 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLCNKAP51800 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms