Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.29■■□□□ 1.16
ALDH1A3P47895 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
ALDH1A3P47895 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A3P47895 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 C1orf229-201ENST00000623686 2258 ntBASIC22.28■■□□□ 1.16
ALDH1A3P47895 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A3P47895 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
ALDH1A3P47895 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A3P47895 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A3P47895 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 AC105036.2-201ENST00000569468 176 ntBASIC22.27■■□□□ 1.16
ALDH1A3P47895 AC142086.2-201ENST00000569753 217 ntBASIC22.27■■□□□ 1.16
ALDH1A3P47895 AC133552.2-202ENST00000575694 574 ntBASIC22.27■■□□□ 1.16
ALDH1A3P47895 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A3P47895 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
ALDH1A3P47895 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
ALDH1A3P47895 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ALDH1A3P47895 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ALDH1A3P47895 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A3P47895 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ALDH1A3P47895 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.26■■□□□ 1.15
ALDH1A3P47895 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A3P47895 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 AC127496.7-201ENST00000625110 1798 ntBASIC22.25■■□□□ 1.15
ALDH1A3P47895 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A3P47895 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A3P47895 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ALDH1A3P47895 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A3P47895 AC003102.1-202ENST00000563394 1796 ntBASIC22.25■■□□□ 1.15
ALDH1A3P47895 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.24■■□□□ 1.15
ALDH1A3P47895 GUSBP6-202ENST00000438529 1198 ntBASIC22.24■■□□□ 1.15
ALDH1A3P47895 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 AC007322.4-201ENST00000509611 723 ntBASIC22.24■■□□□ 1.15
ALDH1A3P47895 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A3P47895 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ALDH1A3P47895 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 KRT16P2-201ENST00000414673 1423 ntBASIC22.23■■□□□ 1.15
ALDH1A3P47895 AC068338.2-201ENST00000563278 1430 ntBASIC22.23■■□□□ 1.15
ALDH1A3P47895 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.23■■□□□ 1.15
ALDH1A3P47895 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A3P47895 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms