Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YLR159C-AYLR159C-A 132 nt3.29□□□□□ -1.88
LSM5P40089 YLR285C-AYLR285C-A 171 nt3.29□□□□□ -1.88
LSM5P40089 YLR339CYLR339C 552 nt3.29□□□□□ -1.88
LSM5P40089 RPL6BYLR448W 531 nt3.29□□□□□ -1.88
LSM5P40089 SHH3YMR118C 591 nt3.29□□□□□ -1.88
LSM5P40089 SAS5YOR213C 747 nt3.29□□□□□ -1.88
LSM5P40089 FDH2YPL275W 711 nt3.29□□□□□ -1.88
LSM5P40089 YPR108W-AYPR108W-A 213 nt3.29□□□□□ -1.88
LSM5P40089 EXO5YBR163W 1758 nt3.29□□□□□ -1.88
LSM5P40089 EXO84YBR102C 2262 nt3.29□□□□□ -1.88
LSM5P40089 PEX6YNL329C 3093 nt3.29□□□□□ -1.88
LSM5P40089 SHQ1YIL104C 1524 nt3.29□□□□□ -1.88
LSM5P40089 PEX5YDR244W 1839 nt3.28□□□□□ -1.88
LSM5P40089 VAC14YLR386W 2643 nt3.28□□□□□ -1.88
LSM5P40089 DUF1YOL087C 3351 nt3.28□□□□□ -1.88
LSM5P40089 AI2Q0055 2565 nt3.28□□□□□ -1.88
LSM5P40089 SPT14YPL175W 1359 nt3.28□□□□□ -1.88
LSM5P40089 RTT109YLL002W 1311 nt3.28□□□□□ -1.88
LSM5P40089 OPI6YDL096C 327 nt3.28□□□□□ -1.88
LSM5P40089 FAP7YDL166C 594 nt3.28□□□□□ -1.88
LSM5P40089 YFR057WYFR057W 456 nt3.28□□□□□ -1.88
LSM5P40089 OST5YGL226C-A 261 nt3.28□□□□□ -1.88
LSM5P40089 YKR070WYKR070W 1059 nt3.28□□□□□ -1.88
LSM5P40089 YOL019W-AYOL019W-A 153 nt3.28□□□□□ -1.88
LSM5P40089 YOR387CYOR387C 621 nt3.28□□□□□ -1.88
LSM5P40089 YBR116CYBR116C 528 nt3.28□□□□□ -1.88
LSM5P40089 YPR022CYPR022C 3402 nt3.28□□□□□ -1.88
LSM5P40089 RRP5YMR229C 5190 nt3.28□□□□□ -1.88
LSM5P40089 RTG3YBL103C 1461 nt3.28□□□□□ -1.88
LSM5P40089 BNI4YNL233W 2679 nt3.27□□□□□ -1.89
LSM5P40089 CDH1YGL003C 1701 nt3.27□□□□□ -1.89
LSM5P40089 STE6YKL209C 3873 nt3.27□□□□□ -1.89
LSM5P40089 YBP2YGL060W 1926 nt3.27□□□□□ -1.89
LSM5P40089 YDR170W-AYDR170W-A 1323 nt3.27□□□□□ -1.89
LSM5P40089 YBL005W-AYBL005W-A 1323 nt3.27□□□□□ -1.89
LSM5P40089 YMR046CYMR046C 1323 nt3.27□□□□□ -1.89
LSM5P40089 YNL284C-AYNL284C-A 1323 nt3.27□□□□□ -1.89
LSM5P40089 ERP3YDL018C 678 nt3.27□□□□□ -1.89
LSM5P40089 YDL157CYDL157C 357 nt3.27□□□□□ -1.89
LSM5P40089 YDR464C-AYDR464C-A 189 nt3.27□□□□□ -1.89
LSM5P40089 YGL230CYGL230C 444 nt3.27□□□□□ -1.89
LSM5P40089 YJL114WYJL114W 681 nt3.27□□□□□ -1.89
LSM5P40089 SRT1YMR101C 1032 nt3.27□□□□□ -1.89
LSM5P40089 YMR122W-AYMR122W-A 255 nt3.27□□□□□ -1.89
LSM5P40089 YNL276CYNL276C 396 nt3.27□□□□□ -1.89
LSM5P40089 HAT1YPL001W 1125 nt3.27□□□□□ -1.89
LSM5P40089 STE23YLR389C 3084 nt3.26□□□□□ -1.89
LSM5P40089 CIK1YMR198W 1785 nt3.26□□□□□ -1.89
LSM5P40089 PSF1YDR013W 627 nt3.26□□□□□ -1.89
LSM5P40089 NRG1YDR043C 696 nt3.26□□□□□ -1.89
LSM5P40089 GEP7YGL057C 864 nt3.26□□□□□ -1.89
LSM5P40089 YGL218WYGL218W 651 nt3.26□□□□□ -1.89
LSM5P40089 PEX34YCL056C 435 nt3.26□□□□□ -1.89
LSM5P40089 MTR4YJL050W 3222 nt3.26□□□□□ -1.89
LSM5P40089 YJL049WYJL049W 1353 nt3.25□□□□□ -1.89
LSM5P40089 MSH4YFL003C 2637 nt3.25□□□□□ -1.89
LSM5P40089 YDR210W-BYDR210W-B 5313 nt3.25□□□□□ -1.89
LSM5P40089 YDR261W-BYDR261W-B 5313 nt3.25□□□□□ -1.89
LSM5P40089 YFL002W-AYFL002W-A 5313 nt3.25□□□□□ -1.89
LSM5P40089 YGR161W-BYGR161W-B 5313 nt3.25□□□□□ -1.89
LSM5P40089 YLR410W-BYLR410W-B 5313 nt3.25□□□□□ -1.89
LSM5P40089 YCL019WYCL019W 5313 nt3.25□□□□□ -1.89
LSM5P40089 BCH1YMR237W 2175 nt3.25□□□□□ -1.89
LSM5P40089 NSP1YJL041W 2472 nt3.25□□□□□ -1.89
LSM5P40089 YFL065CYFL065C 309 nt3.25□□□□□ -1.89
LSM5P40089 RPB9YGL070C 369 nt3.25□□□□□ -1.89
LSM5P40089 VMA7YGR020C 357 nt3.25□□□□□ -1.89
LSM5P40089 ERG25YGR060W 930 nt3.25□□□□□ -1.89
LSM5P40089 VMA10YHR039C-A 345 nt3.25□□□□□ -1.89
LSM5P40089 DAL2YIR029W 1032 nt3.25□□□□□ -1.89
LSM5P40089 YJL032WYJL032W 315 nt3.25□□□□□ -1.89
LSM5P40089 MER1YNL210W 813 nt3.25□□□□□ -1.89
LSM5P40089 GCY1YOR120W 939 nt3.25□□□□□ -1.89
LSM5P40089 PET20YPL159C 762 nt3.25□□□□□ -1.89
LSM5P40089 KAR4YCL055W 1008 nt3.25□□□□□ -1.89
LSM5P40089 NUP60YAR002W 1620 nt3.25□□□□□ -1.89
LSM5P40089 SMC2YFR031C 3513 nt3.25□□□□□ -1.89
LSM5P40089 AEP1YMR064W 1557 nt3.25□□□□□ -1.89
LSM5P40089 TRM82YDR165W 1335 nt3.24□□□□□ -1.89
LSM5P40089 YDR061WYDR061W 1620 nt3.24□□□□□ -1.89
LSM5P40089 STP2YHR006W 1626 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)DtK(UUU)D 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)G1tK(UUU)G1 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)G2tK(UUU)G2 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)KtK(UUU)K 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)LtK(UUU)L 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)OtK(UUU)O 73 nt3.24□□□□□ -1.89
LSM5P40089 tK(UUU)PtK(UUU)P 73 nt3.24□□□□□ -1.89
LSM5P40089 YGL041W-AYGL041W-A 465 nt3.24□□□□□ -1.89
LSM5P40089 MRM2YGL136C 963 nt3.24□□□□□ -1.89
LSM5P40089 GTR2YGR163W 1026 nt3.24□□□□□ -1.89
LSM5P40089 LSM8YJR022W 330 nt3.24□□□□□ -1.89
LSM5P40089 GPX1YKL026C 504 nt3.24□□□□□ -1.89
LSM5P40089 RPS28BYLR264W 204 nt3.24□□□□□ -1.89
LSM5P40089 SPC2YML055W 537 nt3.24□□□□□ -1.89
LSM5P40089 SUB1YMR039C 879 nt3.24□□□□□ -1.89
LSM5P40089 FAR3YMR052W 615 nt3.24□□□□□ -1.89
LSM5P40089 YNL226WYNL226W 411 nt3.24□□□□□ -1.89
LSM5P40089 YNL320WYNL320W 855 nt3.24□□□□□ -1.89
LSM5P40089 snR35snR35 204 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms