Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.9■■□□□ 1.42
CLCN1P35523 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
CLCN1P35523 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.9■■□□□ 1.42
CLCN1P35523 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN1P35523 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN1P35523 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CLCN1P35523 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.9■■□□□ 1.42
CLCN1P35523 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CLCN1P35523 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN1P35523 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLCN1P35523 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCN1P35523 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CLCN1P35523 MIR6724-1-201ENST00000616420 92 ntBASIC23.89■■□□□ 1.41
CLCN1P35523 MIR6724-2-201ENST00000616483 92 ntBASIC23.89■■□□□ 1.41
CLCN1P35523 MIR6724-4-201ENST00000617390 92 ntBASIC23.89■■□□□ 1.41
CLCN1P35523 MIR6724-3-201ENST00000622482 92 ntBASIC23.89■■□□□ 1.41
CLCN1P35523 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CLCN1P35523 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN1P35523 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN1P35523 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CLCN1P35523 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN1P35523 AP005212.1-201ENST00000581547 1997 ntBASIC23.89■■□□□ 1.41
CLCN1P35523 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN1P35523 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCN1P35523 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.88■■□□□ 1.41
CLCN1P35523 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.88■■□□□ 1.41
CLCN1P35523 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CLCN1P35523 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CLCN1P35523 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCN1P35523 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.87■■□□□ 1.41
CLCN1P35523 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.87■■□□□ 1.41
CLCN1P35523 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
CLCN1P35523 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLCN1P35523 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCN1P35523 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CLCN1P35523 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
CLCN1P35523 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
CLCN1P35523 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCN1P35523 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCN1P35523 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
CLCN1P35523 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.86■■□□□ 1.41
CLCN1P35523 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.86■■□□□ 1.41
CLCN1P35523 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.86■■□□□ 1.41
CLCN1P35523 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCN1P35523 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CLCN1P35523 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CLCN1P35523 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.85■■□□□ 1.41
CLCN1P35523 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.85■■□□□ 1.41
CLCN1P35523 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 FP325331.1-202ENST00000623531 1380 ntBASIC23.85■■□□□ 1.41
CLCN1P35523 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN1P35523 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms