Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNB4P30926 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNB4P30926 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNB4P30926 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNB4P30926 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNB4P30926 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.68■□□□□ 0.58
CHRNB4P30926 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNB4P30926 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 KRT16P2-201ENST00000414673 1423 ntBASIC18.67■□□□□ 0.58
CHRNB4P30926 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHRNB4P30926 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.67■□□□□ 0.58
CHRNB4P30926 AL162412.1-201ENST00000567129 965 ntBASIC18.67■□□□□ 0.58
CHRNB4P30926 AC008687.6-201ENST00000596318 630 ntBASIC18.67■□□□□ 0.58
CHRNB4P30926 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHRNB4P30926 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNB4P30926 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNB4P30926 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB4P30926 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNB4P30926 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNB4P30926 AC093827.2-201ENST00000512654 315 ntBASIC18.66■□□□□ 0.58
CHRNB4P30926 AL591742.1-201ENST00000604433 565 ntBASIC18.66■□□□□ 0.58
CHRNB4P30926 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNB4P30926 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHRNB4P30926 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRNB4P30926 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHRNB4P30926 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNB4P30926 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHRNB4P30926 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNB4P30926 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CHRNB4P30926 AC097658.1-201ENST00000475555 843 ntBASIC18.65■□□□□ 0.58
CHRNB4P30926 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.65■□□□□ 0.58
CHRNB4P30926 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.65■□□□□ 0.58
CHRNB4P30926 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.65■□□□□ 0.58
CHRNB4P30926 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHRNB4P30926 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNB4P30926 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNB4P30926 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNB4P30926 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHRNB4P30926 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.64■□□□□ 0.58
CHRNB4P30926 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNB4P30926 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.64■□□□□ 0.58
CHRNB4P30926 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHRNB4P30926 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CHRNB4P30926 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHRNB4P30926 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CHRNB4P30926 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHRNB4P30926 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRNB4P30926 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNB4P30926 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNB4P30926 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 AC137767.1-201ENST00000602918 1920 ntBASIC18.63■□□□□ 0.57
CHRNB4P30926 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNB4P30926 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms