Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1EP28566 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
HTR1EP28566 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
HTR1EP28566 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HTR1EP28566 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.13■□□□□ 0.81
HTR1EP28566 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.13■□□□□ 0.81
HTR1EP28566 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HTR1EP28566 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.13■□□□□ 0.81
HTR1EP28566 AC233992.3-201ENST00000607491 485 ntBASIC20.13■□□□□ 0.81
HTR1EP28566 AC136469.2-201ENST00000623944 1028 ntBASIC20.13■□□□□ 0.81
HTR1EP28566 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 LINC01006-201ENST00000333319 2292 ntBASIC20.13■□□□□ 0.81
HTR1EP28566 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.13■□□□□ 0.81
HTR1EP28566 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTR1EP28566 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HTR1EP28566 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HTR1EP28566 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
HTR1EP28566 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HTR1EP28566 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
HTR1EP28566 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.12■□□□□ 0.81
HTR1EP28566 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HTR1EP28566 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HTR1EP28566 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.12■□□□□ 0.81
HTR1EP28566 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.12■□□□□ 0.81
HTR1EP28566 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.12■□□□□ 0.81
HTR1EP28566 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.12■□□□□ 0.81
HTR1EP28566 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HTR1EP28566 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTR1EP28566 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HTR1EP28566 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.11■□□□□ 0.81
HTR1EP28566 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.11■□□□□ 0.81
HTR1EP28566 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.11■□□□□ 0.81
HTR1EP28566 FEM1AP1-201ENST00000431297 1995 ntBASIC20.11■□□□□ 0.81
HTR1EP28566 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 AC092667.1-201ENST00000434301 2586 ntBASIC20.11■□□□□ 0.81
HTR1EP28566 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTR1EP28566 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.11■□□□□ 0.81
HTR1EP28566 AL049796.1-201ENST00000565336 1766 ntBASIC20.11■□□□□ 0.81
HTR1EP28566 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HTR1EP28566 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.1■□□□□ 0.81
HTR1EP28566 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.1■□□□□ 0.81
HTR1EP28566 AC241377.3-202ENST00000626088 1088 ntBASIC20.1■□□□□ 0.81
HTR1EP28566 AC241585.3-202ENST00000628937 1088 ntBASIC20.1■□□□□ 0.81
HTR1EP28566 AC245100.8-202ENST00000629247 1058 ntBASIC20.1■□□□□ 0.81
HTR1EP28566 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.1■□□□□ 0.81
HTR1EP28566 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HTR1EP28566 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTR1EP28566 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.1■□□□□ 0.81
HTR1EP28566 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HTR1EP28566 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.09■□□□□ 0.81
HTR1EP28566 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.09■□□□□ 0.81
HTR1EP28566 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.09■□□□□ 0.81
HTR1EP28566 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HTR1EP28566 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.09■□□□□ 0.81
HTR1EP28566 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HTR1EP28566 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HTR1EP28566 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTR1EP28566 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTR1EP28566 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.08■□□□□ 0.81
HTR1EP28566 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTR1EP28566 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTR1EP28566 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.08■□□□□ 0.81
HTR1EP28566 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.08■□□□□ 0.81
HTR1EP28566 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HTR1EP28566 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTR1EP28566 BX842568.3-201ENST00000418104 571 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms