Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.99■□□□□ 0.95
HTR1BP28222 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTR1BP28222 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTR1BP28222 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 AC007375.3-201ENST00000600936 2314 ntBASIC20.98■□□□□ 0.95
HTR1BP28222 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTR1BP28222 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.98■□□□□ 0.95
HTR1BP28222 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
HTR1BP28222 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.98■□□□□ 0.95
HTR1BP28222 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HTR1BP28222 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
HTR1BP28222 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.97■□□□□ 0.95
HTR1BP28222 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
HTR1BP28222 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HTR1BP28222 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.97■□□□□ 0.95
HTR1BP28222 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.97■□□□□ 0.95
HTR1BP28222 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HTR1BP28222 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 AC008175.2-201ENST00000612840 297 ntBASIC20.97■□□□□ 0.95
HTR1BP28222 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.97■□□□□ 0.95
HTR1BP28222 AC120498.10-201ENST00000621827 505 ntBASIC20.97■□□□□ 0.95
HTR1BP28222 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.97■□□□□ 0.95
HTR1BP28222 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.97■□□□□ 0.95
HTR1BP28222 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HTR1BP28222 AC127496.7-201ENST00000625110 1798 ntBASIC20.97■□□□□ 0.95
HTR1BP28222 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
HTR1BP28222 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTR1BP28222 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.96■□□□□ 0.95
HTR1BP28222 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.96■□□□□ 0.95
HTR1BP28222 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 HLA-L-209ENST00000420110 1011 ntBASIC20.96■□□□□ 0.95
HTR1BP28222 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.96■□□□□ 0.95
HTR1BP28222 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTR1BP28222 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.96■□□□□ 0.95
HTR1BP28222 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.96■□□□□ 0.95
HTR1BP28222 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HTR1BP28222 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
HTR1BP28222 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 AC092053.2-201ENST00000640557 1818 ntBASIC20.95■□□□□ 0.94
HTR1BP28222 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTR1BP28222 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTR1BP28222 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 AC007322.1-201ENST00000426983 750 ntBASIC20.95■□□□□ 0.94
HTR1BP28222 CROCCP5-201ENST00000436658 830 ntBASIC20.95■□□□□ 0.94
HTR1BP28222 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.95■□□□□ 0.94
HTR1BP28222 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
HTR1BP28222 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.95■□□□□ 0.94
HTR1BP28222 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.95■□□□□ 0.94
HTR1BP28222 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTR1BP28222 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTR1BP28222 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTR1BP28222 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.95■□□□□ 0.94
HTR1BP28222 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.95■□□□□ 0.94
HTR1BP28222 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HTR1BP28222 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.94■□□□□ 0.94
HTR1BP28222 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
HTR1BP28222 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
HTR1BP28222 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTR1BP28222 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.94■□□□□ 0.94
HTR1BP28222 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.94■□□□□ 0.94
HTR1BP28222 MIR663A-201ENST00000385250 93 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms