Protein–RNA interactions for Protein: P23368

ME2, NAD-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME2P23368 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.27■□□□□ 0.84
ME2P23368 AC241377.3-202ENST00000626088 1088 ntBASIC20.27■□□□□ 0.84
ME2P23368 AC241585.3-202ENST00000628937 1088 ntBASIC20.27■□□□□ 0.84
ME2P23368 AC245100.8-202ENST00000629247 1058 ntBASIC20.27■□□□□ 0.84
ME2P23368 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ME2P23368 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ME2P23368 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ME2P23368 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ME2P23368 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ME2P23368 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ME2P23368 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ME2P23368 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ME2P23368 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ME2P23368 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.26■□□□□ 0.83
ME2P23368 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.26■□□□□ 0.83
ME2P23368 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.26■□□□□ 0.83
ME2P23368 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.26■□□□□ 0.83
ME2P23368 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ME2P23368 GABARAPL3-202ENST00000624044 1851 ntBASIC20.26■□□□□ 0.83
ME2P23368 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ME2P23368 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
ME2P23368 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
ME2P23368 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ME2P23368 RNF165-205ENST00000588679 2904 ntBASIC20.25■□□□□ 0.83
ME2P23368 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ME2P23368 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.25■□□□□ 0.83
ME2P23368 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.25■□□□□ 0.83
ME2P23368 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.25■□□□□ 0.83
ME2P23368 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
ME2P23368 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.25■□□□□ 0.83
ME2P23368 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ME2P23368 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.25■□□□□ 0.83
ME2P23368 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ME2P23368 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ME2P23368 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.24■□□□□ 0.83
ME2P23368 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ME2P23368 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 OR7E47P-201ENST00000546390 1422 ntBASIC20.24■□□□□ 0.83
ME2P23368 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ME2P23368 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ME2P23368 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ME2P23368 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
ME2P23368 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ME2P23368 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.23■□□□□ 0.83
ME2P23368 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.23■□□□□ 0.83
ME2P23368 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ME2P23368 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ME2P23368 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ME2P23368 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
ME2P23368 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 DUX4L19-201ENST00000557448 1267 ntBASIC20.22■□□□□ 0.83
ME2P23368 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ME2P23368 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
ME2P23368 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ME2P23368 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ME2P23368 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ME2P23368 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.21■□□□□ 0.83
ME2P23368 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
ME2P23368 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ME2P23368 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
ME2P23368 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
ME2P23368 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ME2P23368 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ME2P23368 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms