Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCL3P19876 LETM1P2-201ENST00000597330 2178 ntBASIC17.72■□□□□ 0.43
CXCL3P19876 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL3P19876 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL3P19876 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CXCL3P19876 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL3P19876 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.71■□□□□ 0.43
CXCL3P19876 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CXCL3P19876 AC009086.3-201ENST00000623486 1008 ntBASIC17.71■□□□□ 0.43
CXCL3P19876 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL3P19876 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.71■□□□□ 0.43
CXCL3P19876 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL3P19876 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL3P19876 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CXCL3P19876 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 PLK5-205ENST00000642079 1969 ntBASIC17.7■□□□□ 0.42
CXCL3P19876 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CXCL3P19876 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CXCL3P19876 AC004448.1-201ENST00000458332 883 ntBASIC17.7■□□□□ 0.42
CXCL3P19876 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCL3P19876 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CXCL3P19876 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CXCL3P19876 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL3P19876 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL3P19876 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CXCL3P19876 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CXCL3P19876 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL3P19876 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
CXCL3P19876 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.69■□□□□ 0.42
CXCL3P19876 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL3P19876 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL3P19876 TNXA-203ENST00000507684 2038 ntBASIC17.69■□□□□ 0.42
CXCL3P19876 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.69■□□□□ 0.42
CXCL3P19876 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCL3P19876 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CXCL3P19876 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCL3P19876 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXCL3P19876 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCL3P19876 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CXCL3P19876 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL3P19876 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL3P19876 FP325331.1-202ENST00000623531 1380 ntBASIC17.67■□□□□ 0.42
CXCL3P19876 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 AC020907.5-201ENST00000624372 1936 ntBASIC17.67■□□□□ 0.42
CXCL3P19876 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CXCL3P19876 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 AC004687.1-201ENST00000579003 1625 ntBASIC17.67■□□□□ 0.42
CXCL3P19876 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCL3P19876 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.67■□□□□ 0.42
CXCL3P19876 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL3P19876 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms