Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYN1P17600 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.22■■□□□ 1.31
SYN1P17600 POU5F1P4-201ENST00000413175 1085 ntBASIC23.21■■□□□ 1.31
SYN1P17600 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 KRT18P35-201ENST00000510488 1269 ntBASIC23.21■■□□□ 1.31
SYN1P17600 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.21■■□□□ 1.31
SYN1P17600 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.21■■□□□ 1.31
SYN1P17600 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.21■■□□□ 1.31
SYN1P17600 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SYN1P17600 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.21■■□□□ 1.31
SYN1P17600 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYN1P17600 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.2■■□□□ 1.3
SYN1P17600 OR7E47P-201ENST00000546390 1422 ntBASIC23.2■■□□□ 1.3
SYN1P17600 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SYN1P17600 RPS2P55-201ENST00000397318 883 ntBASIC23.2■■□□□ 1.3
SYN1P17600 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.2■■□□□ 1.3
SYN1P17600 AC107956.1-201ENST00000494359 873 ntBASIC23.2■■□□□ 1.3
SYN1P17600 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 SOX15-203ENST00000570788 1093 ntBASIC23.2■■□□□ 1.3
SYN1P17600 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYN1P17600 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYN1P17600 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYN1P17600 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
SYN1P17600 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SYN1P17600 AC020928.2-201ENST00000588717 2197 ntBASIC23.19■■□□□ 1.3
SYN1P17600 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.19■■□□□ 1.3
SYN1P17600 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 AC012618.2-201ENST00000428058 849 ntBASIC23.19■■□□□ 1.3
SYN1P17600 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.19■■□□□ 1.3
SYN1P17600 AC233702.5-201ENST00000584107 538 ntBASIC23.19■■□□□ 1.3
SYN1P17600 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYN1P17600 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYN1P17600 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.19■■□□□ 1.3
SYN1P17600 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYN1P17600 AC142381.3-201ENST00000568208 1670 ntBASIC23.19■■□□□ 1.3
SYN1P17600 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYN1P17600 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.18■■□□□ 1.3
SYN1P17600 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SYN1P17600 ARMC10P1-201ENST00000313754 855 ntBASIC23.18■■□□□ 1.3
SYN1P17600 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.18■■□□□ 1.3
SYN1P17600 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.18■■□□□ 1.3
SYN1P17600 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SYN1P17600 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.18■■□□□ 1.3
SYN1P17600 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.18■■□□□ 1.3
SYN1P17600 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYN1P17600 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.18■■□□□ 1.3
SYN1P17600 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.18■■□□□ 1.3
SYN1P17600 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYN1P17600 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SYN1P17600 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.18■■□□□ 1.3
SYN1P17600 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SYN1P17600 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYN1P17600 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.17■■□□□ 1.3
SYN1P17600 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYN1P17600 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.17■■□□□ 1.3
SYN1P17600 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.17■■□□□ 1.3
SYN1P17600 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYN1P17600 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
SYN1P17600 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.17■■□□□ 1.3
SYN1P17600 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.17■■□□□ 1.3
SYN1P17600 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.17■■□□□ 1.3
SYN1P17600 AL034346.1-201ENST00000568244 1277 ntBASIC23.17■■□□□ 1.3
SYN1P17600 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.17■■□□□ 1.3
SYN1P17600 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYN1P17600 KRT16P2-201ENST00000414673 1423 ntBASIC23.16■■□□□ 1.3
SYN1P17600 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYN1P17600 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.16■■□□□ 1.3
SYN1P17600 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.16■■□□□ 1.3
SYN1P17600 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.16■■□□□ 1.3
SYN1P17600 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.16■■□□□ 1.3
SYN1P17600 AC243732.1-201ENST00000612648 864 ntBASIC23.16■■□□□ 1.3
SYN1P17600 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYN1P17600 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.16■■□□□ 1.3
SYN1P17600 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYN1P17600 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYN1P17600 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.15■■□□□ 1.3
SYN1P17600 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYN1P17600 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.15■■□□□ 1.3
SYN1P17600 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.15■■□□□ 1.3
SYN1P17600 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SYN1P17600 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.15■■□□□ 1.3
SYN1P17600 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms