Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.88■□□□□ 0.61
HLA-DPB1P04440 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 AL499627.2-201ENST00000606283 725 ntBASIC18.88■□□□□ 0.61
HLA-DPB1P04440 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 SERBP1P1-201ENST00000396021 1160 ntBASIC18.87■□□□□ 0.61
HLA-DPB1P04440 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 AC026471.6-201ENST00000622954 1905 ntBASIC18.87■□□□□ 0.61
HLA-DPB1P04440 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DPB1P04440 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 AC133637.1-201ENST00000624115 1537 ntBASIC18.86■□□□□ 0.61
HLA-DPB1P04440 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DPB1P04440 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 DUX4L19-201ENST00000557448 1267 ntBASIC18.85■□□□□ 0.61
HLA-DPB1P04440 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPB1P04440 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 UNC93B3-201ENST00000308076 687 ntBASIC18.84■□□□□ 0.61
HLA-DPB1P04440 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms