Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-AP01891 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-AP01891 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-AP01891 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-AP01891 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-AP01891 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-AP01891 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-AP01891 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-AP01891 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-AP01891 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-AP01891 AFG3L1P-217ENST00000557444 2447 ntBASIC17.73■□□□□ 0.43
HLA-AP01891 AP005212.1-201ENST00000581547 1997 ntBASIC17.73■□□□□ 0.43
HLA-AP01891 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-AP01891 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-AP01891 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-AP01891 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-AP01891 BX664725.1-201ENST00000438252 379 ntBASIC17.73■□□□□ 0.43
HLA-AP01891 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.73■□□□□ 0.43
HLA-AP01891 AC137630.3-201ENST00000607245 391 ntBASIC17.73■□□□□ 0.43
HLA-AP01891 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-AP01891 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-AP01891 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-AP01891 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-AP01891 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-AP01891 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 AC239859.2-201ENST00000444165 318 ntBASIC17.72■□□□□ 0.43
HLA-AP01891 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-AP01891 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-AP01891 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-AP01891 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-AP01891 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-AP01891 AC005703.6-201ENST00000623265 1329 ntBASIC17.72■□□□□ 0.43
HLA-AP01891 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-AP01891 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HLA-AP01891 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
HLA-AP01891 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-AP01891 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-AP01891 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-AP01891 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-AP01891 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-AP01891 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-AP01891 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-AP01891 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HLA-AP01891 AC073314.1-201ENST00000568729 2216 ntBASIC17.71■□□□□ 0.43
HLA-AP01891 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-AP01891 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.71■□□□□ 0.42
HLA-AP01891 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
HLA-AP01891 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-AP01891 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-AP01891 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-AP01891 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
HLA-AP01891 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-AP01891 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-AP01891 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.7■□□□□ 0.42
HLA-AP01891 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-AP01891 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-AP01891 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
HLA-AP01891 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-AP01891 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
HLA-AP01891 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms