Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
UBE4BO95155 AC010141.2-201ENST00000452426 721 ntBASIC23.12■■□□□ 1.29
UBE4BO95155 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.12■■□□□ 1.29
UBE4BO95155 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.12■■□□□ 1.29
UBE4BO95155 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE4BO95155 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE4BO95155 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
UBE4BO95155 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.11■■□□□ 1.29
UBE4BO95155 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.11■■□□□ 1.29
UBE4BO95155 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.11■■□□□ 1.29
UBE4BO95155 MIR6821-201ENST00000617625 74 ntBASIC23.11■■□□□ 1.29
UBE4BO95155 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE4BO95155 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE4BO95155 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE4BO95155 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
UBE4BO95155 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
UBE4BO95155 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.1■■□□□ 1.29
UBE4BO95155 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.1■■□□□ 1.29
UBE4BO95155 POU5F1P4-201ENST00000413175 1085 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L2-201ENST00000561772 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 AC008175.2-201ENST00000612840 297 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L6-201ENST00000626483 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L1-201ENST00000627662 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L8-201ENST00000629013 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L3-201ENST00000630187 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L7-201ENST00000630678 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 DUX4L5-201ENST00000630834 1275 ntBASIC23.1■■□□□ 1.29
UBE4BO95155 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
UBE4BO95155 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.1■■□□□ 1.29
UBE4BO95155 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.1■■□□□ 1.29
UBE4BO95155 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.1■■□□□ 1.29
UBE4BO95155 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE4BO95155 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
UBE4BO95155 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.09■■□□□ 1.29
UBE4BO95155 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.09■■□□□ 1.29
UBE4BO95155 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.09■■□□□ 1.29
UBE4BO95155 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
UBE4BO95155 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBE4BO95155 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.08■■□□□ 1.29
UBE4BO95155 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
UBE4BO95155 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.08■■□□□ 1.29
UBE4BO95155 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.08■■□□□ 1.29
UBE4BO95155 AL024507.2-201ENST00000606070 2574 ntBASIC23.08■■□□□ 1.29
UBE4BO95155 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
UBE4BO95155 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
UBE4BO95155 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
UBE4BO95155 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
UBE4BO95155 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.08■■□□□ 1.28
UBE4BO95155 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.08■■□□□ 1.28
UBE4BO95155 AC104187.1-201ENST00000607510 612 ntBASIC23.08■■□□□ 1.28
UBE4BO95155 AC004854.2-201ENST00000608450 1441 ntBASIC23.07■■□□□ 1.28
UBE4BO95155 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
UBE4BO95155 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.07■■□□□ 1.28
UBE4BO95155 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
UBE4BO95155 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.07■■□□□ 1.28
UBE4BO95155 AC034268.1-201ENST00000441047 882 ntBASIC23.07■■□□□ 1.28
UBE4BO95155 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.07■■□□□ 1.28
UBE4BO95155 AP004607.4-201ENST00000530158 1459 ntBASIC23.07■■□□□ 1.28
UBE4BO95155 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
UBE4BO95155 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
UBE4BO95155 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.06■■□□□ 1.28
UBE4BO95155 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
UBE4BO95155 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.06■■□□□ 1.28
UBE4BO95155 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
UBE4BO95155 AC061975.6-201ENST00000579045 1553 ntBASIC23.06■■□□□ 1.28
UBE4BO95155 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms