Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-2O95096 AL137060.1-201ENST00000618151 2648 ntBASIC19.5■□□□□ 0.71
NKX2-2O95096 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-2O95096 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-2O95096 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-2O95096 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NKX2-2O95096 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-2O95096 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-2O95096 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-2O95096 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-2O95096 KRT18P14-201ENST00000534205 1250 ntBASIC19.49■□□□□ 0.71
NKX2-2O95096 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-2O95096 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-2O95096 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-2O95096 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX2-2O95096 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-2O95096 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-2O95096 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
NKX2-2O95096 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-2O95096 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-2O95096 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-2O95096 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-2O95096 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-2O95096 AC138907.5-202ENST00000569484 235 ntBASIC19.47■□□□□ 0.71
NKX2-2O95096 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-2O95096 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NKX2-2O95096 AC005229.4-201ENST00000610085 2198 ntBASIC19.47■□□□□ 0.71
NKX2-2O95096 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-2O95096 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
NKX2-2O95096 AF106564.1-201ENST00000607058 2553 ntBASIC19.46■□□□□ 0.71
NKX2-2O95096 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-2O95096 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX2-2O95096 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX2-2O95096 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
NKX2-2O95096 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-2O95096 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.46■□□□□ 0.71
NKX2-2O95096 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-2O95096 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-2O95096 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-2O95096 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NKX2-2O95096 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-2O95096 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-2O95096 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-2O95096 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NKX2-2O95096 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-2O95096 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-2O95096 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-2O95096 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-2O95096 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-2O95096 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.45■□□□□ 0.7
NKX2-2O95096 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
NKX2-2O95096 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-2O95096 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-2O95096 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-2O95096 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NKX2-2O95096 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms