Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPK3AO75631 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UPK3AO75631 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK3AO75631 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK3AO75631 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK3AO75631 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPK3AO75631 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK3AO75631 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
UPK3AO75631 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPK3AO75631 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPK3AO75631 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UPK3AO75631 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
UPK3AO75631 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.85■□□□□ 0.61
UPK3AO75631 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.85■□□□□ 0.61
UPK3AO75631 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.85■□□□□ 0.61
UPK3AO75631 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
UPK3AO75631 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
UPK3AO75631 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.85■□□□□ 0.61
UPK3AO75631 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.85■□□□□ 0.61
UPK3AO75631 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK3AO75631 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPK3AO75631 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UPK3AO75631 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.84■□□□□ 0.61
UPK3AO75631 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 AC003102.1-202ENST00000563394 1796 ntBASIC18.84■□□□□ 0.61
UPK3AO75631 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.84■□□□□ 0.61
UPK3AO75631 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UPK3AO75631 AC097381.1-201ENST00000429019 1296 ntBASIC18.84■□□□□ 0.61
UPK3AO75631 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.84■□□□□ 0.61
UPK3AO75631 CCDC92B-201ENST00000575506 885 ntBASIC18.84■□□□□ 0.61
UPK3AO75631 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
UPK3AO75631 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.84■□□□□ 0.61
UPK3AO75631 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.84■□□□□ 0.61
UPK3AO75631 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.84■□□□□ 0.61
UPK3AO75631 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK3AO75631 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
UPK3AO75631 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UPK3AO75631 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
UPK3AO75631 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
UPK3AO75631 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UPK3AO75631 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UPK3AO75631 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.83■□□□□ 0.6
UPK3AO75631 AC026271.2-201ENST00000428091 497 ntBASIC18.83■□□□□ 0.6
UPK3AO75631 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.83■□□□□ 0.6
UPK3AO75631 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.83■□□□□ 0.6
UPK3AO75631 RARRES2P6-201ENST00000567333 442 ntBASIC18.83■□□□□ 0.6
UPK3AO75631 TERF1P2-201ENST00000583350 1212 ntBASIC18.83■□□□□ 0.6
UPK3AO75631 AC087623.3-201ENST00000607047 1098 ntBASIC18.83■□□□□ 0.6
UPK3AO75631 MIR6821-201ENST00000617625 74 ntBASIC18.83■□□□□ 0.6
UPK3AO75631 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.83■□□□□ 0.6
UPK3AO75631 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.83■□□□□ 0.6
UPK3AO75631 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
UPK3AO75631 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK3AO75631 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK3AO75631 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK3AO75631 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK3AO75631 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UPK3AO75631 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK3AO75631 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK3AO75631 KRT18P14-201ENST00000534205 1250 ntBASIC18.82■□□□□ 0.6
UPK3AO75631 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK3AO75631 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.82■□□□□ 0.6
UPK3AO75631 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.82■□□□□ 0.6
UPK3AO75631 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms