Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AL451085.2-201ENST00000605085 799 ntBASIC16.33■□□□□ 0.2
ZNF253O75346 AC087239.1-201ENST00000622671 572 ntBASIC16.33■□□□□ 0.2
ZNF253O75346 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF253O75346 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
ZNF253O75346 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ZNF253O75346 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF253O75346 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF253O75346 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF253O75346 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF253O75346 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF253O75346 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF253O75346 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF253O75346 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF253O75346 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF253O75346 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF253O75346 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF253O75346 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF253O75346 OR2I1P-207ENST00000453522 948 ntBASIC16.31■□□□□ 0.2
ZNF253O75346 pRNA.6-201ENST00000610482 90 ntBASIC16.31■□□□□ 0.2
ZNF253O75346 pRNA.5-201ENST00000612139 90 ntBASIC16.31■□□□□ 0.2
ZNF253O75346 pRNA.11-201ENST00000618423 90 ntBASIC16.31■□□□□ 0.2
ZNF253O75346 pRNA.13-201ENST00000619112 90 ntBASIC16.31■□□□□ 0.2
ZNF253O75346 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF253O75346 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF253O75346 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 RARRES2P1-201ENST00000474487 481 ntBASIC16.3■□□□□ 0.2
ZNF253O75346 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF253O75346 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF253O75346 AC092171.4-201ENST00000609130 632 ntBASIC16.3■□□□□ 0.2
ZNF253O75346 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF253O75346 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ZNF253O75346 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF253O75346 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
ZNF253O75346 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF253O75346 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 UNC93B8-201ENST00000511903 705 ntBASIC16.29■□□□□ 0.2
ZNF253O75346 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF253O75346 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF253O75346 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZNF253O75346 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF253O75346 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF253O75346 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF253O75346 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ZNF253O75346 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF253O75346 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF253O75346 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms