Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE3O75131 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPNE3O75131 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CPNE3O75131 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE3O75131 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE3O75131 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE3O75131 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE3O75131 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE3O75131 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE3O75131 AC053503.5-201ENST00000601508 636 ntBASIC20.18■□□□□ 0.82
CPNE3O75131 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE3O75131 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE3O75131 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 C1orf229-201ENST00000623686 2258 ntBASIC20.18■□□□□ 0.82
CPNE3O75131 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE3O75131 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPNE3O75131 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 GPX1P1-201ENST00000388829 606 ntBASIC20.17■□□□□ 0.82
CPNE3O75131 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE3O75131 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CPNE3O75131 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CPNE3O75131 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE3O75131 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE3O75131 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE3O75131 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE3O75131 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 AC139530.1-201ENST00000575312 1977 ntBASIC20.16■□□□□ 0.82
CPNE3O75131 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE3O75131 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE3O75131 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE3O75131 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE3O75131 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE3O75131 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE3O75131 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
CPNE3O75131 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE3O75131 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CPNE3O75131 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE3O75131 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE3O75131 AL355802.2-201ENST00000402069 882 ntBASIC20.15■□□□□ 0.82
CPNE3O75131 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE3O75131 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE3O75131 AC005181.1-201ENST00000604782 1256 ntBASIC20.15■□□□□ 0.82
CPNE3O75131 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.15■□□□□ 0.82
CPNE3O75131 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE3O75131 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.15■□□□□ 0.82
CPNE3O75131 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE3O75131 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.15■□□□□ 0.82
CPNE3O75131 AC233723.2-201ENST00000623798 2106 ntBASIC20.15■□□□□ 0.82
CPNE3O75131 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPNE3O75131 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE3O75131 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE3O75131 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE3O75131 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE3O75131 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE3O75131 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE3O75131 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.14■□□□□ 0.81
CPNE3O75131 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.14■□□□□ 0.81
CPNE3O75131 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE3O75131 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE3O75131 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.14■□□□□ 0.81
CPNE3O75131 AL121832.2-201ENST00000610979 668 ntBASIC20.14■□□□□ 0.81
CPNE3O75131 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE3O75131 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CPNE3O75131 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE3O75131 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE3O75131 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE3O75131 AC010536.3-201ENST00000620306 533 ntBASIC20.13■□□□□ 0.81
CPNE3O75131 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE3O75131 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE3O75131 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE3O75131 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms