Protein–RNA interactions for Protein: O43516

WIPF1, WAS/WASL-interacting protein family member 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1O43516 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.12■□□□□ 0.17
WIPF1O43516 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
WIPF1O43516 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
WIPF1O43516 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.12■□□□□ 0.17
WIPF1O43516 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.12■□□□□ 0.17
WIPF1O43516 EEF1DP3-203ENST00000566025 782 ntBASIC16.12■□□□□ 0.17
WIPF1O43516 OR10C1-204ENST00000622521 1039 ntBASIC16.12■□□□□ 0.17
WIPF1O43516 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
WIPF1O43516 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WIPF1O43516 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 AP004607.7-201ENST00000527152 1677 ntBASIC16.11■□□□□ 0.17
WIPF1O43516 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.11■□□□□ 0.17
WIPF1O43516 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.11■□□□□ 0.17
WIPF1O43516 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.11■□□□□ 0.17
WIPF1O43516 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.11■□□□□ 0.17
WIPF1O43516 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.11■□□□□ 0.17
WIPF1O43516 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.11■□□□□ 0.17
WIPF1O43516 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.11■□□□□ 0.17
WIPF1O43516 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
WIPF1O43516 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.11■□□□□ 0.17
WIPF1O43516 AC016405.3-201ENST00000607710 860 ntBASIC16.11■□□□□ 0.17
WIPF1O43516 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WIPF1O43516 OR7E47P-201ENST00000546390 1422 ntBASIC16.11■□□□□ 0.17
WIPF1O43516 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
WIPF1O43516 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
WIPF1O43516 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WIPF1O43516 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.1■□□□□ 0.17
WIPF1O43516 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.1■□□□□ 0.17
WIPF1O43516 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WIPF1O43516 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.1■□□□□ 0.17
WIPF1O43516 AC053503.5-201ENST00000601508 636 ntBASIC16.1■□□□□ 0.17
WIPF1O43516 AP001002.2-201ENST00000625137 386 ntBASIC16.1■□□□□ 0.17
WIPF1O43516 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WIPF1O43516 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.1■□□□□ 0.17
WIPF1O43516 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.09■□□□□ 0.17
WIPF1O43516 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.09■□□□□ 0.17
WIPF1O43516 AC007322.4-201ENST00000509611 723 ntBASIC16.09■□□□□ 0.17
WIPF1O43516 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.09■□□□□ 0.17
WIPF1O43516 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.09■□□□□ 0.17
WIPF1O43516 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.09■□□□□ 0.17
WIPF1O43516 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.09■□□□□ 0.17
WIPF1O43516 AC013268.1-206ENST00000638368 961 ntBASIC16.09■□□□□ 0.17
WIPF1O43516 AC112229.1-201ENST00000639295 961 ntBASIC16.09■□□□□ 0.17
WIPF1O43516 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
WIPF1O43516 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.09■□□□□ 0.17
WIPF1O43516 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.09■□□□□ 0.17
WIPF1O43516 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WIPF1O43516 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WIPF1O43516 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.08■□□□□ 0.17
WIPF1O43516 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WIPF1O43516 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WIPF1O43516 AL512625.2-201ENST00000417533 625 ntBASIC16.08■□□□□ 0.16
WIPF1O43516 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.08■□□□□ 0.16
WIPF1O43516 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
WIPF1O43516 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.08■□□□□ 0.16
WIPF1O43516 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.08■□□□□ 0.16
WIPF1O43516 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.08■□□□□ 0.16
WIPF1O43516 AC008403.3-201ENST00000598924 454 ntBASIC16.08■□□□□ 0.16
WIPF1O43516 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
WIPF1O43516 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.08■□□□□ 0.16
WIPF1O43516 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
WIPF1O43516 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
WIPF1O43516 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WIPF1O43516 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
WIPF1O43516 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
WIPF1O43516 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WIPF1O43516 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.07■□□□□ 0.16
WIPF1O43516 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.07■□□□□ 0.16
WIPF1O43516 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.07■□□□□ 0.16
WIPF1O43516 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.07■□□□□ 0.16
WIPF1O43516 AC008694.1-202ENST00000636953 945 ntBASIC16.07■□□□□ 0.16
WIPF1O43516 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WIPF1O43516 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WIPF1O43516 AP006587.3-201ENST00000525742 1516 ntBASIC16.07■□□□□ 0.16
WIPF1O43516 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms