Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.85■■■□□ 2.21
PER1O15534 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.85■■■□□ 2.21
PER1O15534 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.85■■■□□ 2.21
PER1O15534 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PER1O15534 Z98882.1-201ENST00000622160 2253 ntBASIC28.85■■■□□ 2.21
PER1O15534 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.84■■■□□ 2.21
PER1O15534 KRT18P20-201ENST00000548986 1279 ntBASIC28.84■■■□□ 2.21
PER1O15534 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC28.84■■■□□ 2.21
PER1O15534 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PER1O15534 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC28.83■■■□□ 2.21
PER1O15534 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.83■■■□□ 2.21
PER1O15534 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PER1O15534 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PER1O15534 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.83■■■□□ 2.21
PER1O15534 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.83■■■□□ 2.21
PER1O15534 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PER1O15534 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PER1O15534 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.82■■■□□ 2.2
PER1O15534 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.82■■■□□ 2.2
PER1O15534 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PER1O15534 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PER1O15534 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC28.82■■■□□ 2.2
PER1O15534 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PER1O15534 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PER1O15534 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.81■■■□□ 2.2
PER1O15534 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PER1O15534 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.81■■■□□ 2.2
PER1O15534 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PER1O15534 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PER1O15534 AC026310.3-201ENST00000625186 2373 ntBASIC28.81■■■□□ 2.2
PER1O15534 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PER1O15534 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
PER1O15534 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.8■■■□□ 2.2
PER1O15534 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC28.8■■■□□ 2.2
PER1O15534 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 DYM-203ENST00000442713 2147 ntTSL 2 BASIC28.8■■■□□ 2.2
PER1O15534 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.8■■■□□ 2.2
PER1O15534 SLC7A5P1-201ENST00000568957 537 ntBASIC28.8■■■□□ 2.2
PER1O15534 UBE2DNL-204ENST00000602536 740 ntBASIC28.8■■■□□ 2.2
PER1O15534 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.8■■■□□ 2.2
PER1O15534 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PER1O15534 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC28.79■■■□□ 2.2
PER1O15534 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.79■■■□□ 2.2
PER1O15534 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PER1O15534 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.79■■■□□ 2.2
PER1O15534 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.79■■■□□ 2.2
PER1O15534 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PER1O15534 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PER1O15534 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.78■■■□□ 2.2
PER1O15534 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.78■■■□□ 2.2
PER1O15534 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 POU5F1P4-201ENST00000413175 1085 ntBASIC28.78■■■□□ 2.2
PER1O15534 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.78■■■□□ 2.2
PER1O15534 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC28.78■■■□□ 2.2
PER1O15534 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.78■■■□□ 2.2
PER1O15534 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PER1O15534 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PER1O15534 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC28.77■■■□□ 2.2
PER1O15534 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PER1O15534 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PER1O15534 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PER1O15534 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
PER1O15534 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PER1O15534 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PER1O15534 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC28.76■■■□□ 2.19
PER1O15534 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PER1O15534 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PER1O15534 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.76■■■□□ 2.19
PER1O15534 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.76■■■□□ 2.19
PER1O15534 AC137761.2-201ENST00000561729 223 ntBASIC28.76■■■□□ 2.19
PER1O15534 AC145350.3-201ENST00000569033 163 ntBASIC28.76■■■□□ 2.19
PER1O15534 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.76■■■□□ 2.19
PER1O15534 AC092666.2-201ENST00000613287 246 ntBASIC28.76■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms