Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC233723.2-201ENST00000623798 2106 ntBASIC25.29■■□□□ 1.64
FOXN1O15353 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
FOXN1O15353 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.28■■□□□ 1.64
FOXN1O15353 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
FOXN1O15353 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.28■■□□□ 1.64
FOXN1O15353 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.28■■□□□ 1.64
FOXN1O15353 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN1O15353 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXN1O15353 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
FOXN1O15353 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
FOXN1O15353 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
FOXN1O15353 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.27■■□□□ 1.64
FOXN1O15353 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.27■■□□□ 1.64
FOXN1O15353 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
FOXN1O15353 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.27■■□□□ 1.64
FOXN1O15353 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.27■■□□□ 1.64
FOXN1O15353 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.27■■□□□ 1.64
FOXN1O15353 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.27■■□□□ 1.64
FOXN1O15353 OR10C1-204ENST00000622521 1039 ntBASIC25.27■■□□□ 1.64
FOXN1O15353 AC013268.1-206ENST00000638368 961 ntBASIC25.27■■□□□ 1.64
FOXN1O15353 AC112229.1-201ENST00000639295 961 ntBASIC25.27■■□□□ 1.64
FOXN1O15353 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXN1O15353 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXN1O15353 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.26■■□□□ 1.63
FOXN1O15353 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.26■■□□□ 1.63
FOXN1O15353 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
FOXN1O15353 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.26■■□□□ 1.63
FOXN1O15353 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXN1O15353 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXN1O15353 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXN1O15353 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
FOXN1O15353 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN1O15353 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN1O15353 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN1O15353 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.25■■□□□ 1.63
FOXN1O15353 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.25■■□□□ 1.63
FOXN1O15353 KRT18P35-201ENST00000510488 1269 ntBASIC25.25■■□□□ 1.63
FOXN1O15353 AC091874.3-201ENST00000512672 1195 ntBASIC25.25■■□□□ 1.63
FOXN1O15353 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.25■■□□□ 1.63
FOXN1O15353 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXN1O15353 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.25■■□□□ 1.63
FOXN1O15353 AC016405.3-201ENST00000607710 860 ntBASIC25.25■■□□□ 1.63
FOXN1O15353 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.25■■□□□ 1.63
FOXN1O15353 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
FOXN1O15353 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
FOXN1O15353 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
FOXN1O15353 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.24■■□□□ 1.63
FOXN1O15353 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN1O15353 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
FOXN1O15353 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN1O15353 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN1O15353 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN1O15353 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
FOXN1O15353 RCN1P1-201ENST00000400413 996 ntBASIC25.24■■□□□ 1.63
FOXN1O15353 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
FOXN1O15353 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.24■■□□□ 1.63
FOXN1O15353 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.24■■□□□ 1.63
FOXN1O15353 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.24■■□□□ 1.63
FOXN1O15353 FAM197Y4-202ENST00000622692 608 ntBASIC25.24■■□□□ 1.63
FOXN1O15353 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.24■■□□□ 1.63
FOXN1O15353 EP400NL-214ENST00000641289 2402 ntBASIC25.24■■□□□ 1.63
FOXN1O15353 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
FOXN1O15353 AL512625.2-201ENST00000417533 625 ntBASIC25.23■■□□□ 1.63
FOXN1O15353 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 AC079834.2-201ENST00000609776 1949 ntBASIC25.23■■□□□ 1.63
FOXN1O15353 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXN1O15353 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXN1O15353 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
FOXN1O15353 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.22■■□□□ 1.63
FOXN1O15353 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FOXN1O15353 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.22■■□□□ 1.63
FOXN1O15353 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXN1O15353 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FOXN1O15353 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms