Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.72■□□□□ 0.91
C4orf47A7E2U8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C4orf47A7E2U8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
C4orf47A7E2U8 OR7E47P-201ENST00000546390 1422 ntBASIC20.7■□□□□ 0.9
C4orf47A7E2U8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 RPPH1-201ENST00000516869 333 ntBASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AL034346.1-201ENST00000568244 1277 ntBASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C4orf47A7E2U8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 C1QBPP2-201ENST00000528754 825 ntBASIC20.69■□□□□ 0.9
C4orf47A7E2U8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
C4orf47A7E2U8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
C4orf47A7E2U8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 RBM17P2-201ENST00000616397 1405 ntBASIC20.68■□□□□ 0.9
C4orf47A7E2U8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C4orf47A7E2U8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 POU5F1P4-201ENST00000413175 1085 ntBASIC20.67■□□□□ 0.9
C4orf47A7E2U8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C4orf47A7E2U8 AP006587.3-201ENST00000525742 1516 ntBASIC20.67■□□□□ 0.9
C4orf47A7E2U8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms