Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RNF222A6NCQ9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.18■□□□□ 0.34
RNF222A6NCQ9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF222A6NCQ9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF222A6NCQ9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 AL512408.1-201ENST00000569378 2000 ntBASIC17.16■□□□□ 0.34
RNF222A6NCQ9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF222A6NCQ9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 TNXA-203ENST00000507684 2038 ntBASIC17.15■□□□□ 0.34
RNF222A6NCQ9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 AL592293.1-201ENST00000502889 1188 ntBASIC17.15■□□□□ 0.34
RNF222A6NCQ9 AC022616.5-201ENST00000518796 181 ntBASIC17.15■□□□□ 0.34
RNF222A6NCQ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF222A6NCQ9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF222A6NCQ9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF222A6NCQ9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF222A6NCQ9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF222A6NCQ9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF222A6NCQ9 AP000974.1-201ENST00000623909 2387 ntBASIC17.14■□□□□ 0.33
RNF222A6NCQ9 AC099778.1-201ENST00000568593 1911 ntBASIC17.14■□□□□ 0.33
RNF222A6NCQ9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms