Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV5S1A1TA0A578 LINC02228-203ENST00000641970 1355 ntBASIC22.1■■□□□ 1.13
TCRBV5S1A1TA0A578 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV5S1A1TA0A578 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV5S1A1TA0A578 AC079140.4-201ENST00000507448 529 ntBASIC22.08■■□□□ 1.13
TCRBV5S1A1TA0A578 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV5S1A1TA0A578 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV5S1A1TA0A578 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV5S1A1TA0A578 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TCRBV5S1A1TA0A578 KRT87P-202ENST00000534226 1464 ntBASIC22.08■■□□□ 1.12
TCRBV5S1A1TA0A578 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV5S1A1TA0A578 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 AC061975.6-201ENST00000579045 1553 ntBASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV5S1A1TA0A578 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 CCDC92B-201ENST00000575506 885 ntBASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.05■■□□□ 1.12
TCRBV5S1A1TA0A578 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TCRBV5S1A1TA0A578 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 AC138907.5-202ENST00000569484 235 ntBASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV5S1A1TA0A578 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV5S1A1TA0A578 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms