Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV22A0A0B4J277 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 OXCT2P1-201ENST00000447263 1535 ntBASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 GABARAPL3-202ENST00000624044 1851 ntBASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV22A0A0B4J277 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV22A0A0B4J277 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ME2-218ENST00000640965 2476 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 LINC01960-201ENST00000563759 1884 ntBASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 SMPD5-203ENST00000639008 1464 ntBASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV22A0A0B4J277 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 ME2-206ENST00000638410 2289 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 ME2-210ENST00000639255 2262 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 AC098818.2-201ENST00000564925 2320 ntBASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 AC005082.1-201ENST00000413042 2259 ntBASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 AC106820.2-201ENST00000563775 3264 ntBASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV22A0A0B4J277 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms