Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.93■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AP003097.1-201ENST00000530657 1135 ntBASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC139530.1-201ENST00000575312 1977 ntBASIC20.92■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AL355472.2-201ENST00000422958 438 ntBASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 KRT17P1-201ENST00000399211 1546 ntBASIC20.89■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSANTD3-TMEFF1A0A0A6YYJ0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.88■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.86■□□□□ 0.93
MSANTD3-TMEFF1A0A0A6YYJ0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms