Protein–RNA interactions for Protein: A0A075B6N3

TRBV24-1, T-cell receptor beta variable 24-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV24-1A0A075B6N3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV24-1A0A075B6N3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 AC112907.3-201ENST00000577781 2400 ntBASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV24-1A0A075B6N3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 AC027702.1-201ENST00000563810 1770 ntBASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 AC020907.5-201ENST00000624372 1936 ntBASIC16.06■□□□□ 0.16
TRBV24-1A0A075B6N3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 AL592295.1-201ENST00000400984 884 ntBASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV24-1A0A075B6N3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 AC016575.1-201ENST00000607026 382 ntBASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 AL162377.1-201ENST00000618844 1793 ntBASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV24-1A0A075B6N3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV24-1A0A075B6N3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV24-1A0A075B6N3 NEFHP1-201ENST00000412845 2629 ntBASIC16.03■□□□□ 0.16
TRBV24-1A0A075B6N3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV24-1A0A075B6N3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms