Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 DDX3X-208ENST00000611546 442 ntTSL 517.63■□□□□ 0.419e-18■□□□□ 8.5
DDX3XO00571 DDX3X-213ENST00000622198 409 ntTSL 417.63■□□□□ 0.419e-18■□□□□ 8.5
DDX3XO00571 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.57e-25■□□□□ 8.5
DDX3XO00571 USP7-208ENST00000563961 4533 ntTSL 515.16■□□□□ 0.027e-25■□□□□ 8.5
DDX3XO00571 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.5■■□□□ 1.832e-6■□□□□ 8.5
DDX3XO00571 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.672e-6■□□□□ 8.5
DDX3XO00571 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.392e-6■□□□□ 8.5
DDX3XO00571 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.39■■□□□ 1.342e-6■□□□□ 8.5
DDX3XO00571 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.292e-6■□□□□ 8.5
DDX3XO00571 USP21-209ENST00000492950 1150 ntTSL 523.11■■□□□ 1.292e-6■□□□□ 8.5
DDX3XO00571 STX5-207ENST00000491231 1719 ntTSL 522.88■■□□□ 1.252e-6■□□□□ 8.5
DDX3XO00571 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.47■■□□□ 1.192e-6■□□□□ 8.5
DDX3XO00571 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.072e-6■□□□□ 8.5
DDX3XO00571 PPP5C-213ENST00000527623 1215 ntTSL 221.62■■□□□ 1.052e-6■□□□□ 8.5
DDX3XO00571 USP21-204ENST00000479344 709 ntTSL 221.41■■□□□ 1.022e-6■□□□□ 8.5
DDX3XO00571 STX5-208ENST00000492066 1627 ntTSL 521.01■□□□□ 0.952e-6■□□□□ 8.5
DDX3XO00571 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.952e-6■□□□□ 8.5
DDX3XO00571 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.84■□□□□ 0.934e-12■□□□□ 8.5
DDX3XO00571 USP32-208ENST00000589335 691 ntTSL 520.72■□□□□ 0.911e-17■□□□□ 8.5
DDX3XO00571 POLR2E-207ENST00000590060 1052 ntTSL 520.62■□□□□ 0.892e-6■□□□□ 8.5
DDX3XO00571 RIC8A-207ENST00000527468 571 ntTSL 220.42■□□□□ 0.862e-6■□□□□ 8.5
DDX3XO00571 NUCB1-212ENST00000492367 1515 ntTSL 220.34■□□□□ 0.852e-6■□□□□ 8.5
DDX3XO00571 STX5-205ENST00000486437 560 ntTSL 420.26■□□□□ 0.832e-6■□□□□ 8.5
DDX3XO00571 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.822e-6■□□□□ 8.5
DDX3XO00571 PPP5C-211ENST00000525507 1300 ntTSL 220.07■□□□□ 0.82e-6■□□□□ 8.5
DDX3XO00571 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.631e-17■□□□□ 8.5
DDX3XO00571 STARD3-205ENST00000471896 2129 ntTSL 218.68■□□□□ 0.582e-6■□□□□ 8.5
DDX3XO00571 PPP5C-206ENST00000486994 2209 ntTSL 218.42■□□□□ 0.542e-6■□□□□ 8.5
DDX3XO00571 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.27■□□□□ 0.524e-12■□□□□ 8.5
DDX3XO00571 RABL6-208ENST00000464941 3361 ntTSL 218.22■□□□□ 0.512e-6■□□□□ 8.5
DDX3XO00571 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.4■□□□□ 0.381e-17■□□□□ 8.5
DDX3XO00571 STX5-206ENST00000488303 604 ntTSL 517.15■□□□□ 0.342e-6■□□□□ 8.5
DDX3XO00571 ASGR1-207ENST00000574330 887 ntTSL 516.67■□□□□ 0.264e-12■□□□□ 8.5
DDX3XO00571 RABL6-205ENST00000435930 3328 ntTSL 216.03■□□□□ 0.162e-6■□□□□ 8.5
DDX3XO00571 PLCXD1-211ENST00000484611 540 ntTSL 415.83■□□□□ 0.122e-6■□□□□ 8.5
DDX3XO00571 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.122e-6■□□□□ 8.5
DDX3XO00571 PPP5C-207ENST00000487483 4675 ntTSL 515.78■□□□□ 0.122e-6■□□□□ 8.5
DDX3XO00571 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.45■□□□□ 0.062e-6■□□□□ 8.5
DDX3XO00571 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 215.29■□□□□ 0.042e-6■□□□□ 8.5
DDX3XO00571 POLR2E-203ENST00000586215 756 ntTSL 215.14■□□□□ 0.012e-6■□□□□ 8.5
DDX3XO00571 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.062e-6■□□□□ 8.5
DDX3XO00571 NUP93-203ENST00000562496 583 ntTSL 414.67□□□□□ -0.064e-12■□□□□ 8.5
DDX3XO00571 ZDHHC16-216ENST00000492610 860 ntTSL 314.13□□□□□ -0.154e-12■□□□□ 8.5
DDX3XO00571 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.182e-6■□□□□ 8.5
DDX3XO00571 ATP6V0E2-208ENST00000483478 475 ntTSL 313.48□□□□□ -0.254e-12■□□□□ 8.5
DDX3XO00571 RABL6-207ENST00000461992 763 ntTSL 1 (best)13.17□□□□□ -0.32e-6■□□□□ 8.5
DDX3XO00571 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC13.06□□□□□ -0.322e-6■□□□□ 8.5
DDX3XO00571 USP32-207ENST00000588898 578 ntTSL 513.04□□□□□ -0.321e-17■□□□□ 8.5
DDX3XO00571 SMIM14-202ENST00000505729 612 ntTSL 412.85□□□□□ -0.352e-6■□□□□ 8.5
DDX3XO00571 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC12.44□□□□□ -0.422e-6■□□□□ 8.5
DDX3XO00571 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.442e-6■□□□□ 8.5
DDX3XO00571 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC12.29□□□□□ -0.441e-17■□□□□ 8.5
DDX3XO00571 ZDHHC16-210ENST00000420089 1362 ntTSL 511.68□□□□□ -0.544e-12■□□□□ 8.5
DDX3XO00571 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC11.32□□□□□ -0.61e-17■□□□□ 8.5
DDX3XO00571 ZDHHC16-211ENST00000433086 888 ntTSL 511.13□□□□□ -0.634e-12■□□□□ 8.5
DDX3XO00571 SGK1-202ENST00000367855 2422 ntTSL 511.1□□□□□ -0.632e-6■□□□□ 8.5
DDX3XO00571 USP32-211ENST00000590133 2563 ntTSL 211.04□□□□□ -0.641e-17■□□□□ 8.5
DDX3XO00571 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC10.9□□□□□ -0.661e-17■□□□□ 8.5
DDX3XO00571 USP32-210ENST00000589761 430 ntTSL 210.7□□□□□ -0.71e-17■□□□□ 8.5
DDX3XO00571 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC10.64□□□□□ -0.712e-6■□□□□ 8.5
DDX3XO00571 ATP6V0E2-210ENST00000495408 569 ntTSL 410.43□□□□□ -0.744e-12■□□□□ 8.5
DDX3XO00571 SGK1-207ENST00000461976 553 ntTSL 410.31□□□□□ -0.762e-6■□□□□ 8.5
DDX3XO00571 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.792e-6■□□□□ 8.5
DDX3XO00571 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC9.93□□□□□ -0.822e-6■□□□□ 8.5
DDX3XO00571 ZDHHC16-218ENST00000495735 1632 ntTSL 59.83□□□□□ -0.844e-12■□□□□ 8.5
DDX3XO00571 SGK1-208ENST00000472859 523 ntTSL 39.78□□□□□ -0.842e-6■□□□□ 8.5
DDX3XO00571 SGK1-228ENST00000532856 573 ntTSL 29.78□□□□□ -0.842e-6■□□□□ 8.5
DDX3XO00571 NUP93-217ENST00000568656 592 ntTSL 49.63□□□□□ -0.874e-12■□□□□ 8.5
DDX3XO00571 NUP93-212ENST00000566678 442 ntTSL 29.4□□□□□ -0.94e-12■□□□□ 8.5
DDX3XO00571 LYRM4-202ENST00000455814 450 ntTSL 38.85□□□□□ -0.992e-6■□□□□ 8.5
DDX3XO00571 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.47□□□□□ -1.052e-6■□□□□ 8.5
DDX3XO00571 ATP6V0E2-209ENST00000490092 501 ntTSL 47.91□□□□□ -1.144e-12■□□□□ 8.5
DDX3XO00571 SGK1-230ENST00000534658 763 ntTSL 57.8□□□□□ -1.162e-6■□□□□ 8.5
DDX3XO00571 SMIM14-203ENST00000507613 680 ntTSL 27.24□□□□□ -1.252e-6■□□□□ 8.5
DDX3XO00571 CUL5-203ENST00000531427 3596 ntTSL 1 (best)7.1□□□□□ -1.272e-6■□□□□ 8.5
DDX3XO00571 SGK1-224ENST00000530421 592 ntTSL 46.75□□□□□ -1.332e-6■□□□□ 8.5
DDX3XO00571 CAST-243ENST00000515160 617 ntTSL 26.71□□□□□ -1.342e-6■□□□□ 8.5
DDX3XO00571 SGK1-227ENST00000532021 696 ntTSL 36.18□□□□□ -1.422e-6■□□□□ 8.5
DDX3XO00571 SGK1-210ENST00000474427 5474 ntTSL 25.27□□□□□ -1.572e-6■□□□□ 8.5
DDX3XO00571 SGK1-221ENST00000525700 541 ntTSL 44.79□□□□□ -1.642e-6■□□□□ 8.5
DDX3XO00571 SGK1-218ENST00000524387 576 ntTSL 44.25□□□□□ -1.732e-6■□□□□ 8.5
DDX3XO00571 SGK1-225ENST00000531575 576 ntTSL 42.25□□□□□ -2.052e-6■□□□□ 8.5
DDX3XO00571 CENPF-202ENST00000464322 689 ntTSL 213.89□□□□□ -0.192e-8■□□□□ 8.5
DDX3XO00571 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.732e-8■□□□□ 8.5
DDX3XO00571 RPL10A-204ENST00000478340 962 ntTSL 218.57■□□□□ 0.565e-76■□□□□ 8.5
DDX3XO00571 RPL10A-205ENST00000490335 632 ntTSL 216.8■□□□□ 0.285e-76■□□□□ 8.5
DDX3XO00571 RPL10A-203ENST00000467020 1069 ntTSL 315.65■□□□□ 0.15e-76■□□□□ 8.5
DDX3XO00571 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)13.14□□□□□ -0.315e-76■□□□□ 8.5
DDX3XO00571 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.475e-76■□□□□ 8.5
DDX3XO00571 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.771e-8■□□□□ 8.4
DDX3XO00571 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.278e-29■□□□□ 8.4
DDX3XO00571 RPS19-204ENST00000598399 1172 ntTSL 513.16□□□□□ -0.38e-29■□□□□ 8.4
DDX3XO00571 RPS19-203ENST00000598261 307 ntTSL 312.16□□□□□ -0.468e-29■□□□□ 8.4
DDX3XO00571 RPL17-210ENST00000581091 573 ntTSL 212.45□□□□□ -0.421e-19■□□□□ 8.4
DDX3XO00571 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.47■■□□□ 1.191e-32■□□□□ 8.4
DDX3XO00571 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.18■■□□□ 1.944e-14■□□□□ 8.4
DDX3XO00571 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.674e-14■□□□□ 8.4
DDX3XO00571 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.39■■□□□ 1.494e-14■□□□□ 8.4
DDX3XO00571 NDEL1-218ENST00000584866 577 ntTSL 520.18■□□□□ 0.824e-14■□□□□ 8.4
DDX3XO00571 NDEL1-209ENST00000580738 552 ntTSL 218.71■□□□□ 0.594e-14■□□□□ 8.4
Retrieved 100 of 47,714 protein–RNA pairs in 4439.9 ms