Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NPM2-214ENST00000621538 645 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
P04436 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 SATB1-AS1-262ENST00000629984 759 ntTSL 5 BASIC10.05□□□□□ -0.8
P04436 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC10.05□□□□□ -0.8
P04436 MIR3663HG-201ENST00000419373 2385 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.05□□□□□ -0.8
P04436 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC10.05□□□□□ -0.8
P04436 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 VASH2-206ENST00000366968 4224 ntTSL 2 BASIC10.05□□□□□ -0.8
P04436 RNLS-202ENST00000371947 3385 ntTSL 2 BASIC10.05□□□□□ -0.8
P04436 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC10.05□□□□□ -0.8
P04436 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC10.05□□□□□ -0.8
P04436 GADL1-202ENST00000454381 4509 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 SLC26A8-208ENST00000490799 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P04436 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.05□□□□□ -0.8
P04436 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC10.05□□□□□ -0.8
P04436 RPL15-204ENST00000413699 2053 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
P04436 PIGN-204ENST00000585458 1819 ntTSL 5 BASIC10.05□□□□□ -0.8
P04436 SYT11-201ENST00000368324 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04436 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
P04436 PSMA2-201ENST00000223321 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 KNSTRN-216ENST00000608100 1495 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 PSTPIP2-201ENST00000409746 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 LAMB3-203ENST00000391911 4305 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
P04436 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 CSMD2-204ENST00000373380 4379 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC10.04□□□□□ -0.8
P04436 RELL1-202ENST00000454158 1350 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P04436 AL591885.1-201ENST00000440494 1799 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 AC022148.1-201ENST00000316807 3267 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 GOLGA6C-201ENST00000300576 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 PIH1D3-202ENST00000372453 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 FAM76A-201ENST00000010299 1050 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 GH1-202ENST00000342364 537 ntTSL 5 BASIC10.04□□□□□ -0.8
P04436 KITLG-203ENST00000357116 565 ntTSL 4 BASIC10.04□□□□□ -0.8
P04436 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 MIR596-201ENST00000385091 77 ntBASIC10.04□□□□□ -0.8
P04436 AC104131.1-201ENST00000392363 1194 ntBASIC10.04□□□□□ -0.8
P04436 MIR922-201ENST00000401223 81 ntBASIC10.04□□□□□ -0.8
P04436 AC111152.1-201ENST00000421447 693 ntTSL 3 BASIC10.04□□□□□ -0.8
P04436 AC009502.1-204ENST00000442416 361 ntTSL 3 BASIC10.04□□□□□ -0.8
P04436 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC10.04□□□□□ -0.8
P04436 RNMTL1P2-201ENST00000454810 951 ntBASIC10.04□□□□□ -0.8
P04436 GH1-204ENST00000458650 756 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 AP000926.2-201ENST00000469983 358 ntBASIC10.04□□□□□ -0.8
P04436 RN7SL183P-201ENST00000488870 298 ntBASIC10.04□□□□□ -0.8
P04436 AL117348.1-201ENST00000513672 342 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 TCF7-211ENST00000518915 1254 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 AC138356.3-201ENST00000523507 1228 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 AP000757.1-201ENST00000534150 959 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 OR7E47P-203ENST00000548970 984 ntBASIC10.04□□□□□ -0.8
P04436 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC10.04□□□□□ -0.8
P04436 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 OR7E19P-201ENST00000588789 934 ntBASIC10.04□□□□□ -0.8
P04436 PHF5CP-201ENST00000591298 325 ntBASIC10.04□□□□□ -0.8
P04436 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC10.04□□□□□ -0.8
P04436 GH1-206ENST00000617086 376 ntTSL 5 BASIC10.04□□□□□ -0.8
P04436 FRMD5-212ENST00000636859 958 ntTSL 5 BASIC10.04□□□□□ -0.8
P04436 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 BMPR1B-208ENST00000515059 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 NPHS1-201ENST00000353632 3741 ntTSL 5 BASIC10.04□□□□□ -0.8
P04436 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P04436 AC094103.1-201ENST00000502634 1404 ntBASIC10.04□□□□□ -0.8
P04436 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 RNF146-202ENST00000356799 2267 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P04436 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.04□□□□□ -0.8
P04436 LINC02029-201ENST00000469196 1497 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04436 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
P04436 LILRB4-203ENST00000391734 1602 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P04436 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
P04436 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 AL118505.1-201ENST00000619370 1932 ntBASIC10.03□□□□□ -0.8
P04436 CDKL1-201ENST00000216378 2209 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 CDKL2-202ENST00000429927 3383 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 ACSL6-202ENST00000357096 6298 ntTSL 5 BASIC10.03□□□□□ -0.8
P04436 ALDH3A2-202ENST00000339618 3828 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P04436 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
P04436 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms