RNA–Protein interactions for RNA: ENST00000429927.6

CDKL2-202, Transcript of cyclin dependent kinase like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKL2, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2-202ENST00000429927 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
CDKL2-202ENST00000429927 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
CDKL2-202ENST00000429927 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
CDKL2-202ENST00000429927 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
CDKL2-202ENST00000429927 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
CDKL2-202ENST00000429927 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
CDKL2-202ENST00000429927 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
CDKL2-202ENST00000429927 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
CDKL2-202ENST00000429927 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
CDKL2-202ENST00000429927 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
CDKL2-202ENST00000429927 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
CDKL2-202ENST00000429927 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.63
CDKL2-202ENST00000429927 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
CDKL2-202ENST00000429927 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
CDKL2-202ENST00000429927 HRCP23327 699 aa18.7■□□□□ 0.58
CDKL2-202ENST00000429927 ABCC9O60706 1549 aa18.69■□□□□ 0.58
CDKL2-202ENST00000429927 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
CDKL2-202ENST00000429927 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
CDKL2-202ENST00000429927 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
CDKL2-202ENST00000429927 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
CDKL2-202ENST00000429927 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
CDKL2-202ENST00000429927 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
CDKL2-202ENST00000429927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.51
CDKL2-202ENST00000429927 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
CDKL2-202ENST00000429927 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
CDKL2-202ENST00000429927 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
CDKL2-202ENST00000429927 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
CDKL2-202ENST00000429927 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
CDKL2-202ENST00000429927 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
CDKL2-202ENST00000429927 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
CDKL2-202ENST00000429927 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
CDKL2-202ENST00000429927 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
CDKL2-202ENST00000429927 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
CDKL2-202ENST00000429927 WIZO95785 1651 aa17.79■□□□□ 0.44
CDKL2-202ENST00000429927 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
CDKL2-202ENST00000429927 MYT1Q01538 1121 aa17.7■□□□□ 0.42
CDKL2-202ENST00000429927 ITGAEP38570 1179 aa17.69■□□□□ 0.42
CDKL2-202ENST00000429927 SOGA1O94964 1423 aa17.68■□□□□ 0.42
CDKL2-202ENST00000429927 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
CDKL2-202ENST00000429927 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
CDKL2-202ENST00000429927 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
CDKL2-202ENST00000429927 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
CDKL2-202ENST00000429927 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
CDKL2-202ENST00000429927 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
CDKL2-202ENST00000429927 APLP2Q06481 763 aa17.47■□□□□ 0.39
CDKL2-202ENST00000429927 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
CDKL2-202ENST00000429927 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
CDKL2-202ENST00000429927 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
CDKL2-202ENST00000429927 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
CDKL2-202ENST00000429927 NACADO15069 1562 aa17.37■□□□□ 0.37
CDKL2-202ENST00000429927 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
CDKL2-202ENST00000429927 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
CDKL2-202ENST00000429927 MIER1Q8N108 512 aa17.24■□□□□ 0.35
CDKL2-202ENST00000429927 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
CDKL2-202ENST00000429927 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
CDKL2-202ENST00000429927 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
CDKL2-202ENST00000429927 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
CDKL2-202ENST00000429927 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
CDKL2-202ENST00000429927 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
CDKL2-202ENST00000429927 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
CDKL2-202ENST00000429927 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
CDKL2-202ENST00000429927 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
CDKL2-202ENST00000429927 CLIP1P30622 1438 aa17.09■□□□□ 0.33
CDKL2-202ENST00000429927 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
CDKL2-202ENST00000429927 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
CDKL2-202ENST00000429927 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
CDKL2-202ENST00000429927 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
CDKL2-202ENST00000429927 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
CDKL2-202ENST00000429927 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
CDKL2-202ENST00000429927 KCNH8Q96L42 1107 aa17■□□□□ 0.31
CDKL2-202ENST00000429927 BCANQ96GW7 911 aa16.97■□□□□ 0.31
CDKL2-202ENST00000429927 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
CDKL2-202ENST00000429927 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
CDKL2-202ENST00000429927 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
CDKL2-202ENST00000429927 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
CDKL2-202ENST00000429927 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
CDKL2-202ENST00000429927 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
CDKL2-202ENST00000429927 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
CDKL2-202ENST00000429927 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
CDKL2-202ENST00000429927 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
CDKL2-202ENST00000429927 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
CDKL2-202ENST00000429927 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
CDKL2-202ENST00000429927 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CDKL2-202ENST00000429927 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
CDKL2-202ENST00000429927 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
CDKL2-202ENST00000429927 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
CDKL2-202ENST00000429927 CUX2O14529 1486 aa16.68■□□□□ 0.26
CDKL2-202ENST00000429927 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
CDKL2-202ENST00000429927 EEA1Q15075 1411 aa16.66■□□□□ 0.26
CDKL2-202ENST00000429927 KIF21BO75037 1637 aa16.66■□□□□ 0.26
CDKL2-202ENST00000429927 FOXD1Q16676 465 aa16.65■□□□□ 0.26
CDKL2-202ENST00000429927 RRP7BPQ9NSQ0 103 aa16.64■□□□□ 0.25
CDKL2-202ENST00000429927 FBLN2P98095 1184 aa16.63■□□□□ 0.25
CDKL2-202ENST00000429927 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
CDKL2-202ENST00000429927 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
CDKL2-202ENST00000429927 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
CDKL2-202ENST00000429927 KIF27Q86VH2 1401 aa16.58■□□□□ 0.25
CDKL2-202ENST00000429927 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.25
CDKL2-202ENST00000429927 NESP48681 1621 aa16.57■□□□□ 0.24
CDKL2-202ENST00000429927 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms