Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 AC087742.1-201ENST00000575880 1738 ntBASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01558Q9Y6Z2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 AC007613.1-201ENST00000572811 2597 ntBASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01558Q9Y6Z2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 AL049812.1-201ENST00000432563 2267 ntBASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01558Q9Y6Z2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01558Q9Y6Z2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms